Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00846 ATGCAAGTGGCGGCAGAAGTTCAACACACCCATCACCACCAAGACACTCCGATGTGCCGCCAAATCCAGCTCACTATAACCGATCACACCCTCTCGCAAACCACTGCTGTCGCTACGGACGGTGCCTCTGACAAGCTCGATGGAGAGGATCTCTTCATTCCGCCCCTCAACTTCGCCATGGTTGATAATGGCATTTTCCGCTCTGGCTTCCCCGAACCTGCCAACTTCTCCTTCCTCCAAACCCTTGGCCTCCGCTCCATCATATATTTGTGTCCTGAGCCGTATCCGGAGGCCAACATGGAGTTCCTCAAGTCAAATGGGATCAAGCTGTATCATTTTGGGATCGAGGGTCATAAGGAACCTTTTGTGAACATTCCAGAGGACACAATCCGTGAAGCACTGAAAGTTGTCCTTGATGTCAGGAATCACCCAGTTATAATTCACTGTAAGCGGGGAAAGCACCGAACAGGTTGTTTAGTAGGATGCTATAGAAAATTGCAAAAGTGGTGCTTGTCATCTGTCTTTGATGAGTACCAGCGCTTTGCAGCCGCCAAAGCAAGAGTTTCAGATCAGAGGTTTGTAGAGTTGTTTGATATTTCCAGCATGAAACATTTGCCTATACCCTTTTCATGTCTGAAGAGGTAA 645 0.4822 MQVAAEVQHTHHHQDTPMCRQIQLTITDHTLSQTTAVATDGASDKLDGEDLFIPPLNFAMVDNGIFRSGFPEPANFSFLQTLGLRSIIYLCPEPYPEANMEFLKSNGIKLYHFGIEGHKEPFVNIPEDTIREALKVVLDVRNHPVIIHCKRGKHRTGCLVGCYRKLQKWCLSSVFDEYQRFAAAKARVSDQRFVELFDISSMKHLPIPFSCLKR 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00846 214 ProSitePatterns Tyrosine specific protein phosphatases active site. 147 157 IPR016130 GO:0016311|GO:0016791
Phco3g00846 214 FunFam probable tyrosine-protein phosphatase At1g05000 51 201 - -
Phco3g00846 214 Gene3D Protein tyrosine phosphatase superfamily 51 201 IPR029021 -
Phco3g00846 214 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 53 199 IPR029021 -
Phco3g00846 214 PANTHER TYROSINE-PROTEIN PHOSPHATASE 39 203 - -
Phco3g00846 214 ProSiteProfiles Dual specificity protein phosphatase domain profile. 57 208 IPR020422 GO:0006470|GO:0008138
Phco3g00846 214 CDD PFA-DSP_Siw14 51 198 - -
Phco3g00846 214 PRINTS Plant and fungal dual specificity phosphatase signature 52 69 IPR020428 GO:0016791
Phco3g00846 214 PRINTS Plant and fungal dual specificity phosphatase signature 108 122 IPR020428 GO:0016791
Phco3g00846 214 PRINTS Plant and fungal dual specificity phosphatase signature 125 139 IPR020428 GO:0016791
Phco3g00846 214 PRINTS Plant and fungal dual specificity phosphatase signature 89 102 IPR020428 GO:0016791
Phco3g00846 214 Pfam Tyrosine phosphatase family 53 204 IPR004861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00846 Phco-Chr3 7087753 7091088 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00846 3 7087753 7091088 Phco3g00846 3 7087753 7091088 ECH