Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00809 ATGACCGAGACCCCGAAAATTGGCGCAGTCGCTTTCCCGGCGACGCCAAGGGCGAAATGCGACCCTGGTATTGTATCAGGGTCAGGTCAGAACCCGGGGATTATAAGGTTTGGTTTGAGAGCTGAAATTGATACTTCGCCGCCGTTCGGGTCTGTCAAGGAAGCTGTGACCCGTTTCGAAGGAACCGGACCTTGGACACCCTTTTACAAATTCGGAGAGGCTCGTAACAGTGCTGAAGACTTTGACATAAAGAGAGTGGAGGAAGAAGCAGCAAAGTTAGAAAAGGATTTGATAGTGAAAGAACTCGAGACACTTGATGTGCTTGAAGAACTGGGAGCAACCAAAGCAATTTTGGAGGAATTAAAGCTGCAGCTACAATCAGAAGCATTGAATTGCTTAGCAACTCGAGGTGAAAATTCATGTGAAAAGGTTGGAGTTGCTGTTAGAAATTGTGTGAATGGTATCAACAATGAAGAGCAGACATTGCAAAGTTCGAGTCCGTGTGCAACTTCATCTGATCTGTTCTTAGTGGAGTTAAGACAAGCTAAAATGAGCCTTGGTAAAACGATTAATGATCTTGAAGTGATACAATCTTCTGTTGAAGATTTAAATAAGAAGATGAAGAAGGAAAGGCTTTTTGTTGAGAGGACACGGGAGAAACTAGCGTCGAAGTTTGCAGCTGTCTCTACTCAAGAAGTTACCAAAACGGAAGCAGGGTTTAATCCTCCTGAAGCTACTGCAGGAACAGGTTGCACTTGTCATCATCTCCTAAATGGTGGGAGGAGTTTCGAATTTGATACTGGACAGTGCAATGGAATGAATGAAACAAGAAGCTCTGAAGTTTTAAGGCCCTTGCCTGAGTTTGGAGAGAATGGATTTAGTATTAAGACTGCTGAGATGAGGTGGTTTGCAGCGAAAAAGATGGAAGAAGCTGCAGTGGCGGCAGAAGCCGTTGCTCTTGCTGAAATTGAGGCTCTATGTTGCCCTGAATTTTCTCTTCCAGAACATCAGAAAGTGGCTTTTGCCTTAGGGGAGTGCTCTCCTCTAAATCCCGTAGTTCAATTTCATCAAGAGTCAACTTTGAAGAAGGTAACAGATTCCAAATTCCAAATTGACAGAATAGGTATTTCTGAACTGGGTATTTTGAAAAAGTTTGAGGAAGCAACAGAAGAAGTTCTACGCAGCAAACAAGTCTTGACTGAGGCATTAAATAGTGTTGAAAGTGCAAATATAAAGCAGCTTGCTGCTGAAGAGGCTCTTCGGAGATGGATTCCTGAGAATGATCTAAAAGGACAGCCATTGATTAAGAGCAGGACTTTCAATCAAGCTGGAATTTGTCAAGATTCTCCTCTACCAGATGTAATCCGATCAAATACAACTACCAATGATCCGAAGCATGCCTTGAGGTCTTCAGTTTCAATGAGAGATGTACTTAGCAAAAAGCAAGTTCTTGAAGATTACACTACAACAAAGGATATGCAAGAGCATTCTGAAAAGACGGTAGCATTGAGTCAAATGCTTCGAGCATTGAAGGAGGAACAAACTCTACCTACAATACCCGAGAAAGATGGGAAGAGTAATCAAAAGCAAAAGCAGTTCATAGCGTCTAGGAAAAAGTTCAGTTTCATTCAAATTTCACTCCCCTTGGGAAAGCGAACTGCCCAGGTTGACGAAGTGAGGGAATTTGTTCATGAAGATTTAGTTCCATATGTTGGAGAAGCTTTGACAATTGTGAGGAAAGAGGTCCGAATGATCCTATGCCCTTTTTAA 1770 0.4249 MTETPKIGAVAFPATPRAKCDPGIVSGSGQNPGIIRFGLRAEIDTSPPFGSVKEAVTRFEGTGPWTPFYKFGEARNSAEDFDIKRVEEEAAKLEKDLIVKELETLDVLEELGATKAILEELKLQLQSEALNCLATRGENSCEKVGVAVRNCVNGINNEEQTLQSSSPCATSSDLFLVELRQAKMSLGKTINDLEVIQSSVEDLNKKMKKERLFVERTREKLASKFAAVSTQEVTKTEAGFNPPEATAGTGCTCHHLLNGGRSFEFDTGQCNGMNETRSSEVLRPLPEFGENGFSIKTAEMRWFAAKKMEEAAVAAEAVALAEIEALCCPEFSLPEHQKVAFALGECSPLNPVVQFHQESTLKKVTDSKFQIDRIGISELGILKKFEEATEEVLRSKQVLTEALNSVESANIKQLAAEEALRRWIPENDLKGQPLIKSRTFNQAGICQDSPLPDVIRSNTTTNDPKHALRSSVSMRDVLSKKQVLEDYTTTKDMQEHSEKTVALSQMLRALKEEQTLPTIPEKDGKSNQKQKQFIASRKKFSFIQISLPLGKRTAQVDEVREFVHEDLVPYVGEALTIVRKEVRMILCPF 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00809 589 Coils Coil 108 128 - -
Phco3g00809 589 Coils Coil 493 513 - -
Phco3g00809 589 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 166 488 - -
Phco3g00809 589 Coils Coil 76 103 - -
Phco3g00809 589 Pfam Weak chloroplast movement under blue light 41 236 IPR008545 -
Phco3g00809 589 Pfam Weak chloroplast movement under blue light 178 427 IPR008545 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00809 Phco-Chr3 6682364 6685125 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02837 2 57652969 57655317 Phco3g00809 3 6682364 6685125 ECH
Phco3g00809 3 6682364 6685125 Phco3g00809 3 6682364 6685125 ECH
Phco2g02837 2 57652969 57655317 Phco3g00809 3 6682364 6685125 PCT