Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00738 ATGGCCACCGTCACCTACAGCTACAAAATGTTCAAGTACTTCAACAGAACCTTCGCCATCTCCGAGCAGGCCCCTCCGCCGGACGTCAAGGACGCATTCTCCCTCTTCGCCGACGGCGCAGACTCCATGTCCGCCGACCAGCTCCTCCACTTTCTGCACGACCACCAACTCGAATCGGACTACACAGAAGAGGATTCCAACCGCATCGTGGAAACCGTCCTGCAATCGCGCGCACAAAACGCCGAATGCGACTCCGACAACAACGGTCTCACGCTCGACGAGTTCTTCCGCTTCTTGTTCCTCGTCGATTTCAATGATGCTCTCAAATCTCAGGTACATCATGATATGAATGCTCCGTTGTCACATTATTTCATATATACAGGGCACAATTCCTATCTGACTGGGAATCAGCTGAGCAGCGATTGCAGTGATGTGCCAATCATAAAGGCTTTGCAAAGAGGTGTGCGAGTAATTGAACTAGATTTATGGCCAAATTCAACTAAAGATGATATCGACGTAGTTCATGGAAGGACACTTACTGCTCCTGTCTCACTTATCCAATGTTTGAAGTCCATAAAAGAGTATGCTTTTGTTAAATCTGAGTACCCACTAATTATAACTTTAGAGGACCACCTTACACCATTTCTTCAAGCTAAAGTTGCAGAGATGATAGCTCAAGAATTTGGAGATCTGCTATATTATCCTGAGACGGATCTTCTCACAGAATTTCCCACACCAGAGTCGGTGAAAGGTCGAATTCTTATATCAACCAAACCACCAAAAGAATATCTTGAATCCAAGCAATTCAAGGATAGTGACAGTGAGAGGGAATCAATTGATGAAGGAACATCATCGCCATGCATTATCACTGAATTGGAAGTTGCTGATGAAAAGTCCGATGGAAATGATCTTGATGAGGAAAGCTTGAATGCCCGTGATAAAAAACCAGACCAACAGAGTATACCAGAGTACAAACGTTTAATTACAATCCATGCTGGGAAGCCAAAGGGTAATGTAAAGGACCACTTAAATGTTGTTGGGGGTGTAAAGCGCTTGAGCTTGAGCGAGCAGGAACTTGAAAGGGCTTCTATCGCTCATGGATCTGATATTGTTAGGTATACACAGAAGAATATTATCAGGGTGTATCCAAAGGGAACACGTGTTAACTCCTCAAATTACAGGCCACATATAGGATGGATCTACGGAGCTCAGATGGTGGCATTTAACATGCAGGGGCATGGAAAATCACTCTGGTATATGCAAGGGATGTTTAGAGCGAATGGCGGGTGTGGTTATGTGAAAAAGCCTTCATTTCTGATAGAACAAGGCCCAGATGATGAGGTTTTTGATCCTAAAAAACCAATGCCAGTGAAAAAGACATTGATGGTAAAAGTGTATTTGGGAAACGGATGGAGCACAGATTTCAGTAAAACACACTTCGATACATTCTCTCCGCCAGACTTTTACACAAAGGTTTGCATTGTTGGAATACCCGCTGATCAAGTCAATAGGAAGACCAAGATAATTCATGATGATTGGTTTCCCGTTTGGGATGAAGAGTTTGAATTTCCTTTGTGTGTTCCAGAACTAGCTTTGCTCTGGATAGAGGTTCGAGAGTATGATAAGCATGAAAAGGATGACTTTGGCGGGCAAGCATGTTTCCCAGTCCCTGAGCTAAGATCTGGTTTCCGGGTAGTCCCACTATTTGATGAGAAGGGCGAGCAATTAAAATCTGTAAAGCTTTTAATGCGGTTTCAGTTCAAATGA 1767 0.438 MATVTYSYKMFKYFNRTFAISEQAPPPDVKDAFSLFADGADSMSADQLLHFLHDHQLESDYTEEDSNRIVETVLQSRAQNAECDSDNNGLTLDEFFRFLFLVDFNDALKSQVHHDMNAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALQRGVRVIELDLWPNSTKDDIDVVHGRTLTAPVSLIQCLKSIKEYAFVKSEYPLIITLEDHLTPFLQAKVAEMIAQEFGDLLYYPETDLLTEFPTPESVKGRILISTKPPKEYLESKQFKDSDSERESIDEGTSSPCIITELEVADEKSDGNDLDEESLNARDKKPDQQSIPEYKRLITIHAGKPKGNVKDHLNVVGGVKRLSLSEQELERASIAHGSDIVRYTQKNIIRVYPKGTRVNSSNYRPHIGWIYGAQMVAFNMQGHGKSLWYMQGMFRANGGCGYVKKPSFLIEQGPDDEVFDPKKPMPVKKTLMVKVYLGNGWSTDFSKTHFDTFSPPDFYTKVCIVGIPADQVNRKTKIIHDDWFPVWDEEFEFPLCVPELALLWIEVREYDKHEKDDFGGQACFPVPELRSGFRVVPLFDEKGEQLKSVKLLMRFQFK 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00738 588 FunFam Phosphoinositide phospholipase C 455 588 - -
Phco3g00738 588 Gene3D - 23 111 - -
Phco3g00738 588 PRINTS Phospholipase C signature 145 165 IPR001192 GO:0035556
Phco3g00738 588 PRINTS Phospholipase C signature 554 564 IPR001192 GO:0035556
Phco3g00738 588 PRINTS Phospholipase C signature 119 137 IPR001192 GO:0035556
Phco3g00738 588 PRINTS Phospholipase C signature 378 399 IPR001192 GO:0035556
Phco3g00738 588 PRINTS Phospholipase C signature 242 259 IPR001192 GO:0035556
Phco3g00738 588 PRINTS Phospholipase C signature 399 417 IPR001192 GO:0035556
Phco3g00738 588 FunFam Phosphoinositide phospholipase C 24 110 - -
Phco3g00738 588 CDD C2_PLC_like 458 588 - -
Phco3g00738 588 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 352 438 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Phco3g00738 588 Pfam C2 domain 462 562 IPR000008 -
Phco3g00738 588 SUPERFAMILY EF-hand 10 116 IPR011992 -
Phco3g00738 588 ProSiteProfiles C2 domain profile. 441 570 IPR000008 -
Phco3g00738 588 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 353 439 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Phco3g00738 588 MobiDBLite consensus disorder prediction 264 283 - -
Phco3g00738 588 SMART plcy_3 324 440 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Phco3g00738 588 SMART plcx_3 114 258 IPR000909 -
Phco3g00738 588 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 10 587 IPR001192 GO:0035556
Phco3g00738 588 MobiDBLite consensus disorder prediction 304 319 - -
Phco3g00738 588 MobiDBLite consensus disorder prediction 295 319 - -
Phco3g00738 588 Pfam Phosphatidylinositol-specific phospholipase C, X domain 116 258 IPR000909 -
Phco3g00738 588 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 114 258 - -
Phco3g00738 588 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 460 587 IPR035892 -
Phco3g00738 588 SMART C2_3c 460 568 IPR000008 -
Phco3g00738 588 MobiDBLite consensus disorder prediction 264 280 - -
Phco3g00738 588 Gene3D Phosphatidylinositol (PI) phosphodiesterase 112 452 IPR017946 GO:0006629|GO:0008081
Phco3g00738 588 SUPERFAMILY PLC-like phosphodiesterases 114 441 IPR017946 GO:0006629|GO:0008081
Phco3g00738 588 Gene3D C2 domain 454 588 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00738 Phco-Chr3 6042657 6047328 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02774 2 57194907 57202039 Phco3g00738 3 6042657 6047328 ECH
Phco3g00738 3 6042657 6047328 Phco3g00738 3 6042657 6047328 ECH
Phco2g02774 2 57194907 57202039 Phco3g00738 3 6042657 6047328 PCT