Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00733 ATGGCATCTTTCATCACACCACTCATCCTTCTCTTCATCTCCGCCCTCTTCCTTCTCCTCCACCGTCGATCCCGCTACCGCCGCCTCCGCCTCCGCCTTCCTCCGGGAACCCTCGGTCTCCCCTTCGCCGGTGAGACCCTGCAGCTCATATCAGCCTACAAGACCGACAACCCTGAACCATTCATCGACCACCGCGTCCACCGCTATGGTCCAATCTTCACCACCCATGTCTTCGGCGAACCCACTGTCTTCTCCGCAGACCCGGAGACCAACCGCTTCATTCTGCTCAACGAAGGGAAACTCTTCGAATGTAGCTACCCCGGTTCCATATCCAACCTCCTCGGAAAACACTCTCTGCTTCTCATGAAGGGCTCTCTCCACAAGAGAATGCACTCCCTCACCATGAGTTTCGCCAACTCTTCCATCATCAAGGATCATTTGCTCGTTGACATAGACCGTCTCATCCGGCTCAATCTCGATTCCTGGTCCGACCGGGTTTTTCTCATGGAAGAAGCCAAAAAGATAACGTTTGAGTTGACAGTGAAGCAGTTGATGAGCTTTGATCCAGGTGAATGGAGTGAGACTCTAAGGAAAGAGTATGTTCTTGTGATCGAAGGATTTTTCACTCTACCATTGCCTCTCTTTTCAACTACCTACCGCAGAGCCATCAAGGCTAGGACGAAGGTGGCAGAGGCATTAACGTTGATAGTGAAGGAGAGAAGAAAAGAAAACGTAAAGGAGGAGAAAAAGAATGACATGCTAGGGGCATTGTTGGCCTCCGGCAACCACTTTTCCGACGAAGAAATAGTGGATTTTATGTTGGCTTTGCTCGTCGCCGGTTATGAAACCACCTCCACCATAATGACTCTTGCCGTCAAGTTCCTCACGGAGACTCCTCTGGCATTGGCACAACTCAAGGAAGAGCATGATCAAATCAGAGCCAAGAAAAGTCACCCTGAAGAACCGCTGGAGTGGACAGATTACAAGTCAATGGCATTTACTCAATGCGTTGTGAATGAGACTTTGAGGGTGGCAAACATAATTGGTGGGATATTTAGAAGAGCAATGACAGACATAAACATAAAAGGTTACACTATTCCAAAGGGATGGAGAGTCTTTGCTTCATTTCGTGCTGTACATCTAAACCCAGATCATTACAAAGATGCCCGCACCTTCAATCCATGGAGATGGCAGAGTAACTCAGAAGCAACTAGCCCTGGGAATGTATACACCCCCTTTGGAGGAGGGCCACGCCTTTGCCCTGGTTATGAGCTTGCCCGAGTGGTACTCTCTGTCTTCCTTCACCGCATTGTCACCCGTTATAGTTGGTTTCCTGCAGAAGAAGACAAGTTGGTGTTTTTCCCAACCACTAGGACGCAGAAGAGGTATCCTATCATAGTGAAGCGTAGAGAGGAGTTCAGACCAAAGTTGTCGCGCGGCCTGTGTCGTCGCGTTGAGATAGCCTCCCATTGTCGTGCTGGTGCTGGCTCCGCCGCTGAATCTCCGTTGCCACCGCAACTTCCCTCTTTTGCCGCGGTTGCTGGACTTCGCTCTTCAACAGGTTTGTCGCCACTGTTGATTTAG 1584 0.5013 MASFITPLILLFISALFLLLHRRSRYRRLRLRLPPGTLGLPFAGETLQLISAYKTDNPEPFIDHRVHRYGPIFTTHVFGEPTVFSADPETNRFILLNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIKDHLLVDIDRLIRLNLDSWSDRVFLMEEAKKITFELTVKQLMSFDPGEWSETLRKEYVLVIEGFFTLPLPLFSTTYRRAIKARTKVAEALTLIVKERRKENVKEEKKNDMLGALLASGNHFSDEEIVDFMLALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDQIRAKKSHPEEPLEWTDYKSMAFTQCVVNETLRVANIIGGIFRRAMTDINIKGYTIPKGWRVFASFRAVHLNPDHYKDARTFNPWRWQSNSEATSPGNVYTPFGGGPRLCPGYELARVVLSVFLHRIVTRYSWFPAEEDKLVFFPTTRTQKRYPIIVKRREEFRPKLSRGLCRRVEIASHCRAGAGSAAESPLPPQLPSFAAVAGLRSSTGLSPLLI 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00733 527 SUPERFAMILY Cytochrome P450 25 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g00733 527 FunFam Cytochrome P450 90A1 21 470 - -
Phco3g00733 527 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g00733 527 PRINTS E-class P450 group I signature 375 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g00733 527 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g00733 527 PRINTS E-class P450 group I signature 288 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g00733 527 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g00733 527 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g00733 527 PRINTS E-class P450 group I signature 335 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g00733 527 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g00733 527 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g00733 527 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g00733 527 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g00733 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Phco3g00733 527 CDD CYP90-like 65 469 - -
Phco3g00733 527 Gene3D Cytochrome P450 24 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco3g00733 527 PANTHER CYTOCHROME P450 26 29 444 - -
Phco3g00733 527 Pfam Cytochrome P450 210 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00733 Phco-Chr3 6010743 6022382 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00733 3 6010743 6022382 Phco3g00733 3 6010743 6022382 ECH
Phco2g02764 2 57107948 57113210 Phco3g00733 3 6010743 6022382 PCT