Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00726 ATGATCTCGATCCTCCAAACTCAACCCTCTTCATCACCAACCACTCATTCTTCCTCACTTGTTTCTTACCATCCCAACACAACCTTTACCCTTCTTGTCTTCATTTCTTGCTTGCTGGGACTTTCTTTGTATTTTAATAATCTTGGAACAATGTTACCACAGAAGCAAGGTGAAGAAACCATGATGTCAAGCCTCAATGAAACTGTTGAGCGTGAAGAGAGAGAGGATGAGAAGGTGGGTGGTTCACATTCCAGTTTGAGAAGCTTTCTGTGGCATGGTGGATCTGTTTATGATGCATGGTTCAGCTGTGCTTCAAATCAGGTTGCGCAGGTTCTGCTAACACTGCCATACTCTTTCGCTCAGCTGGGAATGCTTTCTGGCGTCATATTCCAAGTCTTCTACGGGATAATGGGAAGTTGGACTGCTTATTTGATTAGCATTCTGTACATCGAGTACAGGAGCAGAAAAGAGAAAGAGAATGTCAGCTTCAAAAACCATGTCATTCAGTGGTTTGAAGTGCTGGAAGGTTTGCTTGGTCCATACTGGAAAGCCATTGGCTTGGCCTTTAATTGCACTTTTCTCCTCTTCGGATCTGTCATCCAGCTTATAGCTTGTGCAAGTAACATATACTACATAAATGACCACTTGGATAAGAGGACCTGGACTTACATATTCGGAGCATGCTGCGCCACAACTGTGTTCGTACCTTCATTTCACAACTACAGGATTTGGTCTTTCCTTGGTCTTGGCATGACCACGTACACAGCCTGGTACTTAACCATTGCAGCAATCGTTCATGGCCAGGTTGAAAATGTGACTCACACGGGGCCCAAAAAATTGGTTTTGTATTTCACGGGAGCCACCAACATTCTCTACACTTTCGGCGGGCACGCCGTCACAGTGGAAATCATGCATGCAATGTGGAAACCTCAAAAGTTCAAATATATCTATCTTTATGCAACTCTTTTTGTATTCACACTCACCCTACCATCTGCCATTGCCGTTTACTGGGCCTTTGGTGACCAACTCCTGGACCACTCCAATGCCTTCTCTCTTCTCCCCCGTTCTGGTTGGCGTGATACAGGTGTCATCTTAATGCTGATTCACCAGTTTATCACTTTTGGATTTGCTTGCACACCATTGTATTTTGTGTGGGAGAAAGTGATAGGAATGCATGACACAAAGAGCATATGTTTGAGGGCACTTGCAAGGTTGCCGGTGGTGATACCAATATGGTTTTTGGCTATTATTTTCCCTTTCTTTGGCCCTATTAACTCTGCTGTGGGGGCACTTTTGGTTACCTTCACCGTCTATATCATCCCTGCTTCTGCCCATATGCTCACTTACAGGTCTGCTTCTGCACGACAGAATGCTGCTGAGAAATTGCCCTTCTTCGTCCCAAACTGGACGTTAATGTATGTGATCAATGCATTTGTGGTGGTGTGGGTTCTAGTGGTGGGATTTGGATTTGGAGGGTGGGCTAGCATGACAAACTTCATCAAACAGGTTGACACATTTGGACTCTTTGCCAAGTGCTACCAGTGCCCCCCGCATAAAACAGCAGCTTCCAATCAAACACTGCATCACTGA 1590 0.4497 MISILQTQPSSSPTTHSSSLVSYHPNTTFTLLVFISCLLGLSLYFNNLGTMLPQKQGEETMMSSLNETVEREEREDEKVGGSHSSLRSFLWHGGSVYDAWFSCASNQVAQVLLTLPYSFAQLGMLSGVIFQVFYGIMGSWTAYLISILYIEYRSRKEKENVSFKNHVIQWFEVLEGLLGPYWKAIGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLGMTTYTAWYLTIAAIVHGQVENVTHTGPKKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLYATLFVFTLTLPSAIAVYWAFGDQLLDHSNAFSLLPRSGWRDTGVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVTFTVYIIPASAHMLTYRSASARQNAAEKLPFFVPNWTLMYVINAFVVVWVLVVGFGFGGWASMTNFIKQVDTFGLFAKCYQCPPHKTAASNQTLHH 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00726 529 PANTHER OS05G0424000 PROTEIN-RELATED 98 476 - -
Phco3g00726 529 Coils Coil 55 75 - -
Phco3g00726 529 Pfam Transmembrane amino acid transporter protein 92 485 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00726 Phco-Chr3 5958603 5963880 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02757 2 57052060 57056494 Phco3g00726 3 5958603 5963880 ECH
Phco3g00726 3 5958603 5963880 Phco3g00726 3 5958603 5963880 ECH
Phco2g02757 2 57052060 57056494 Phco3g00726 3 5958603 5963880 PCT