Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00715 ATGCCTTTTTCTGATTCTGCAACTACCTTACTCTCCAAATGCACCGTCTTTCCAGACCAAAACTCTACTATCGGAAACCTTAAACTCTCTGTTTCGGACCTCCCCATGTTGTCCTGCCACTATATCCAAAAGGGATGCCTCTTTACCCAACCCAATATTCCACTCTACTCTTTAATTCCTCTTCTTAAATCTGCACTCTCTCGCACACTTTCTCTCTTTCCACCCCTCGCCGGCCGTTTAACTACCGATTCCCAAGGTTACGTTTACATCACTTGCAACGACGCCGGCGTCGATTTCATACACGCCAATGCCACCACCATTCGCATCTGCGACCTACTGTCCCCACTCGACGTCCCGGAATATTTCAAAGAGTTCTTCGCCTTCGACAGGAAAGTCAGCTACACCGGCCATTACTCACCAATTCTCGCTGTTCAGGTCACCGAACTCGCTGACGGCCTCTTCATCGGCTGCGCCGTCAATCATGCCGTCACCGATGGTACCTCCTTCTGGAACTTCTTCAATACCTTCGCTCAGCTCTGCAGAAAAGCGAATAAAAGCATTTGCAATGTACCGTACTTCCACCGCGACTCCATTCTGATCTCTGACGCCGTCCTCCGTCTACCGGAGGGCGGTCCTCAGGTCACGTTCGATTCTCACGCGCCGCTGCGCGAGAGAATCTTCAGTTTCAGCCGCGAAACGATTCAGAAACTGAAGGCCAAGACGAACAACCGTCGGTGTCAGGAGAGCAACAGCGCGACCGTCGAGTTGATGCGGAAGCAAAGCAACGATCATCACGCGAAGGAGAGCAACGGTAAAGCCGGTACAATTCTGGAGAGTTGGTTCAAGGTGAACTCGAATTCGAAACCGCAAACGATTACCGAAACGATGGAGATTTCGTCGTTTCAATCAGTGTGCGCGTTGCTGTGGCGCGCGATTACGCGCGCGAGGAAACTGCCTGCTTCCAAAACTACCACGTTCAGAATGGCGGTTAACTGTCGTCACCGAGTAGAACCAAAATTGGAACAGTACTACTTCGGGAACGCGATTCAGAGCGTGCCAACGTACGCTTGTGCTGGTGACGTGTTATCCAGGGATCTACGGTGGTGCGCGGAGCAGCTGAACTCAAACGTGAAGGCGCACGACGACGCCATGGTGCGGCGCTTCGTAGACGATTGGGAGCAGAAACCCAGGTGCTTCCCTCTCGGGAACCCTGACGGCGCATCCATCACTATGGGTAGTTCTCCGAGGTTTCCAATGTACGATAACAATTTCGGGTGGGGGAGACCTCTGGCGGTGAGAAGTGGAAGAGCGAACAAATTCGACGGTAAGATCTCGGCGTTTCCCGGAAGAGATGGAACAGGGACCGTTGATCTGGAGGTTGTTTTAGCGCCCGAAACCATGGACGCGCTGGAATCTGATCCAGAATTCACGAGATATGCAACGTGTCAGTTGTGA 1455 0.5237 MPFSDSATTLLSKCTVFPDQNSTIGNLKLSVSDLPMLSCHYIQKGCLFTQPNIPLYSLIPLLKSALSRTLSLFPPLAGRLTTDSQGYVYITCNDAGVDFIHANATTIRICDLLSPLDVPEYFKEFFAFDRKVSYTGHYSPILAVQVTELADGLFIGCAVNHAVTDGTSFWNFFNTFAQLCRKANKSICNVPYFHRDSILISDAVLRLPEGGPQVTFDSHAPLRERIFSFSRETIQKLKAKTNNRRCQESNSATVELMRKQSNDHHAKESNGKAGTILESWFKVNSNSKPQTITETMEISSFQSVCALLWRAITRARKLPASKTTTFRMAVNCRHRVEPKLEQYYFGNAIQSVPTYACAGDVLSRDLRWCAEQLNSNVKAHDDAMVRRFVDDWEQKPRCFPLGNPDGASITMGSSPRFPMYDNNFGWGRPLAVRSGRANKFDGKISAFPGRDGTGTVDLEVVLAPETMDALESDPEFTRYATCQL 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00715 484 Gene3D - 8 206 IPR023213 -
Phco3g00715 484 SUPERFAMILY CoA-dependent acyltransferases 37 182 - -
Phco3g00715 484 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 11 476 - -
Phco3g00715 484 Pfam Transferase family 9 476 - -
Phco3g00715 484 Gene3D - 221 474 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00715 Phco-Chr3 5868583 5870037 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02751 2 56987672 56989477 Phco3g00715 3 5868583 5870037 ECH
Phco3g00715 3 5868583 5870037 Phco3g00715 3 5868583 5870037 ECH
Phco2g02750 2 56976637 56978271 Phco3g00715 3 5868583 5870037 PCT
Phco3g00715 3 5868583 5870037 Phco2g02751 2 56987672 56989477 PCT