Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00542 ATGCCAAAGACACGAACTGTTGGAGTGGCCATGGACTTTTCTCCCACTAGCAAATTAGCCCTTCGTTGGGCCGTTGAAAATCTCATCAACAAAGGTGATCAAATCATTTTGATCAATGTTCAGCCTCCCCATGCTCATCACACCCGAAAGGAGCTTTTTGAGGACACTGGTTCACCTTTGGTGCCTTTGGAGGAACTGAGGGAGTTGAATTTTGCTAAGCAATATGGAATTGCTAGAGATCCTGAGGTCATAGATATCCTTAATACTGCCTCCAAGACAAAAGGGGCAAAGGCAGTGGCAAAGGTGTATTGGGGAGATCCAAGGGAGAAGTTGTGTAATGCTGTGGAAGATCTTCACCTGGACTCTTTAGTTGTTGGAAGCAGGGGTTTAGGTCCCATTAAAAGGGTGTTGTTGGGCAGTGTAAGCAAGCATGTGATGACAAATGCCTCTTGTCCCGTCACAGTGGTTAAGGCAAATCAATCTTCCCATTGA 492 0.4573 MPKTRTVGVAMDFSPTSKLALRWAVENLINKGDQIILINVQPPHAHHTRKELFEDTGSPLVPLEELRELNFAKQYGIARDPEVIDILNTASKTKGAKAVAKVYWGDPREKLCNAVEDLHLDSLVVGSRGLGPIKRVLLGSVSKHVMTNASCPVTVVKANQSSH 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00542 163 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 4 157 - -
Phco3g00542 163 Pfam Universal stress protein family 5 157 IPR006016 -
Phco3g00542 163 FunFam Universal stress protein family protein 2 160 - -
Phco3g00542 163 PANTHER IMP2'P 1 161 - -
Phco3g00542 163 CDD USP_Like 6 156 - -
Phco3g00542 163 PRINTS Universal stress protein signature 117 129 IPR006015 -
Phco3g00542 163 PRINTS Universal stress protein signature 135 157 IPR006015 -
Phco3g00542 163 PRINTS Universal stress protein signature 4 22 IPR006015 -
Phco3g00542 163 Gene3D HUPs 2 163 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00542 Phco-Chr3 4234605 4235570 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00542 3 4234605 4235570 Phco3g00542 3 4234605 4235570 ECH