Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00523 ATGGCTTCTGCACCAGCCTTAAAACGCACAGATTCTGTCATAGATAATATGCCTGATGCATTGAGGCAGAGTCGGTACCACATGAAGAGGTGTTTTGCCAAGTACCTGGAAAAGGGTCGGAGGATTATGAAACATCACCATTTGATGGAAGAAATGGAACTAGTTATAGATGACAAAAGTGAAAGAAGTCAAGTTTTGGAGGGTATTCTTGGCTTCATATTGAGCTCCACCCAGGAAGCTGTCGTTGATCCACCATACGTTGCCTTTGCAATAAGGCCTAATCCAGGAATTTGGGAATTTGTAAAAGTGAGCTCTGAAGACCTTTCTGTTGAGGCTATCACCCCCACTGACTTCCTCAAATTCAAGGAAAGGGTAAATGACGAAAAATGGGCAACCGATGAGAATTCATTTGAAGCAGACTTTGGAGCATTCGATTTCCAAATTCCTCAACTAACCCTCTCATCTTCAATTGGAAATGGACTCCAATTTACTTCTAAGTTCTTAACTTCCAAGTTAACTGGGAAATTGGAGAAAACACAGCCTATAGTGGACTACTTGCTAACACTAAATCATCAGGGAGAAAACTTGATGATAAATGAGAGCCTGAACTCTGCTGCAAAGCTACAGATGGCACTGGTAGTGGCTGATGCATTCCTCTCAGCACTTCCCAAAGACACTGCATATCAAAATTTTGAGCTAAGGTTCAAGGAGTGGGGTTTCGAGAGAGGGTGGGGAGATACTGCAGAAAGAGTGAAGGAGACAATGAGAACTCTATCAGAAGTACTTCAAGCACCTGACCCAGTCAACCTGGAGAAATTTTTAAGTAGGTTACCAACAATATTCAATGTAGCCATCTTCTCAGTTCATGGTTATTTTGGGCAAGCAGATGTTCTTGGCTTGCCAGACACAGGTGGCCAGATAGTTTACATATTGGACCAAGTCAAGTCTCTGGAAGCAGAGTTGCTTCTGAGAATCAAGCAACAAGGGCTAAATGTGAAACCTCAAATTCTTGTGATAACAAGACTCATACCTGATGCTCGGGGAACCAAGTGTCACCAGGAGTTGGAACCAATCAGTGATACTAAGCACTCCCACATTTTACGTGTGCCTTTTCAGACAGATAAAGGAATACTACGTCAATGGGTTTCTCGCTTTGATATTTACCCCTATCTTGAGAGGTTTACACAGGATGCAACGACCAAGATTCTAGAGTTCATGGAAGGGAAACCAGATCTTGTTATTGGAAATTACACAGATGGAAATTTGGTAGCATCACTAATGGCTAGAAAACTTGGAATAACTCAGGGAACTATAGCACATGCTTTAGAGAAGACCAAGTATGAAGACTCAGATGTCAAGTGGAAAGAGTTGGATCCCAAATATCACTTCTCATGTCAATTCATGGCTGATACAGTGGCAATGAATGCAGCTGATTTCATCATAACCAGCACATACCAGGAAATTGCTGGAAGCAAAGATAGACCTGGACAATATGAAAGCCATGCAGCATTTACACTCCCAGGGCTGTGTAGAGTTGTTTCAGGGATAAACGTGTTTGATCCTAAGTTCAACATAGCTGCGCCAGGAGCAGACCAGTCTGTCTATTTCCCTTACACAGAGAAAGAAAAAAGGCTCACTCAATTTCACCCTTCCATTGAGGACCTTCTTTTTGGTAAAGTGGATAACAATGAGCATATTGGATACCTAGCAGATAGGAGGAAGCCAATTATTTTCTCAATGGCTAGGCTTGATGTTGTAAAGAACTTAAGCGGTTTAGTTGAATGGTTTGGCAAGAACAAGAGATTGAGAAATTTGGTGAACCTTGTCATAGTAGGGGGCTTCTTTGACCCTTCAAAATCAAAAGATAGGGAGGAAATGTCAGAAATAAAAAAGATGCATGACTCAATTGATAAGTACCAACTGAAGGGTCAGTTTAGATGGATTGCTGCACAGACTGATAGGTATCGCAATGGAGAGCTCTACCGTTGCATCGCTGACACAAGAGGAGCCTTTGTGCAGCCTGCTATATATGAAGCATTTGGATTAACTGTCATTGAAGCAATGAACTGTGGATTGCCCACTTTTGCTACCAACCAAGGAGGTCCAGCAGAAATTATTGTTGATGGGGTCTCTGGCTTCCACATTGATCCCCTTAATGGCGATGAATCAAGCAAAAAAATTGCTGATTTCTTTGAAAAATGCAAAGTGGATCCATCACAATGGAATGTGATTTCTGCAGCCGGATTGCAGCGCATAAATGAATGCTATACTTGGAAAATTTATGCAAACAAGATGGTAAACATGGGGAACATTTACACCTTTTGGAGACAAGTGAATAAGGAGCAAAAAGAGGCAAAACAGAGATACATTCAGATGTTCTATAATCTTATATTCAAGAATTTGGTTAAGACTGTACCTGTTCCAAGTGATGAACCTCAGCAACCAGTGGCCAAGCAGCCTAGTCTTAAATCTCAGAGCACAAGACGTTCACAGTCCAGCAGACTGCAAAGGTTATTCGGAAATTAA 2526 0.4165 MASAPALKRTDSVIDNMPDALRQSRYHMKRCFAKYLEKGRRIMKHHHLMEEMELVIDDKSERSQVLEGILGFILSSTQEAVVDPPYVAFAIRPNPGIWEFVKVSSEDLSVEAITPTDFLKFKERVNDEKWATDENSFEADFGAFDFQIPQLTLSSSIGNGLQFTSKFLTSKLTGKLEKTQPIVDYLLTLNHQGENLMINESLNSAAKLQMALVVADAFLSALPKDTAYQNFELRFKEWGFERGWGDTAERVKETMRTLSEVLQAPDPVNLEKFLSRLPTIFNVAIFSVHGYFGQADVLGLPDTGGQIVYILDQVKSLEAELLLRIKQQGLNVKPQILVITRLIPDARGTKCHQELEPISDTKHSHILRVPFQTDKGILRQWVSRFDIYPYLERFTQDATTKILEFMEGKPDLVIGNYTDGNLVASLMARKLGITQGTIAHALEKTKYEDSDVKWKELDPKYHFSCQFMADTVAMNAADFIITSTYQEIAGSKDRPGQYESHAAFTLPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKEKRLTQFHPSIEDLLFGKVDNNEHIGYLADRRKPIIFSMARLDVVKNLSGLVEWFGKNKRLRNLVNLVIVGGFFDPSKSKDREEMSEIKKMHDSIDKYQLKGQFRWIAAQTDRYRNGELYRCIADTRGAFVQPAIYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPLNGDESSKKIADFFEKCKVDPSQWNVISAAGLQRINECYTWKIYANKMVNMGNIYTFWRQVNKEQKEAKQRYIQMFYNLIFKNLVKTVPVPSDEPQQPVAKQPSLKSQSTRRSQSSRLQRLFGN 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00523 841 Gene3D Glycogen Phosphorylase B; 531 758 - -
Phco3g00523 841 Gene3D - 150 279 - -
Phco3g00523 841 MobiDBLite consensus disorder prediction 808 841 - -
Phco3g00523 841 NCBIfam sucrose synthase 26 806 IPR012820 GO:0005985|GO:0016157
Phco3g00523 841 Pfam Sucrose synthase 9 557 IPR000368 GO:0005985|GO:0016157
Phco3g00523 841 MobiDBLite consensus disorder prediction 814 841 - -
Phco3g00523 841 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 300 767 - -
Phco3g00523 841 Gene3D Glycogen Phosphorylase B; 284 801 - -
Phco3g00523 841 FunFam Sucrose synthase 150 279 - -
Phco3g00523 841 FunFam Sucrose synthase 531 758 - -
Phco3g00523 841 FunFam Sucrose synthase 12 149 - -
Phco3g00523 841 Gene3D - 11 149 - -
Phco3g00523 841 Pfam Glycosyl transferases group 1 567 733 IPR001296 GO:0016757
Phco3g00523 841 PANTHER - 7 810 IPR012820 GO:0005985|GO:0016157
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00523 Phco-Chr3 4054773 4059689 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00523 3 4054773 4059689 Phco3g00523 3 4054773 4059689 ECH