Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00510 ATGGATCAGCTCAAACCAAGCGCTGCTAACTCTTCTCCTCTCACACCGCTAGGTTTCTTGGACAGAGCCGCCACCGTTTATGGCGACGTCCCTTCCATTGTCTACAACCACACAACCTTCACCTGGGATCAGACGCGCCGCCGATGCCTCCAGCTCGCCTCCGCCATCTCCTCCCTAGGAATCCGCCGCGGCAGCGTCGTCTCCGTCGTCGCTCCCAACATTCCGGCCATGTACGAGCTCCAGTTTTCCATCCCCTTCGCCGGCGCTGTTCTCAATAACATCAACCTCCGCCTCGACGCTCGCACCATCTCCATCATCCTATGCCATGCGAACTCCACGCTCGTCTTCGTGGACTGCGGCTCACGCGACCTCGTCCTCGAAGCCTTGTCCCTCTTCCCTAAACACCACACTCAACGCCCACTCCTGGTTCTCATCGCTGACGACAGTGTCGAAAACACAAACGTCTCAAGCACCGGTGATTTCGTTGACACATACGAGGGCCTGGTGAGCAAGGGCGATCCGAACTTTGAGTGGGTCCGGCCCAAATCGGAGTGGGACCCGATGATACTTAACTACACGTCGGGAACGACGTCGTCTCCGAAAGGCGTTGTTCACTCCCACAGAGGAACGTTTATAGTCTCCGTCGACACGCTTATCGATTGGGCGGTTCCCAAGCGCCCCAACTATCTCTGGACGCTCCCGATATTCCACGCTAACGGGTGGAGCCTCCCGTGGGGAATTGCTGCCTTGGGCGGCACCAGCATCTGCGTCCGCAAGTTCGATGCTGCGATTATTTACTCTCTCATAAAGCGACATCACGTGACACACATGTGCGGCGCGCCGGTGGTGCTCAGCATGTTGACAAACTCCCCGGACAACAAACCTTTGGAGAAACCGGTTCATATACTGACCGCGGGAGCACCACCGCCAGCGGCGGTGCTCCACCGGACGGAGGCGCTCGGGTTTGTGGTGAGCCACGGGTACGGACTGACCGAAACCGGGGGTTTGGTGGTGTCGTGCGCGTGGAAGGAGAAGTGGAACCGGCTGCCGGCGGCGGAGCGGGCGCGGCTGAAGGCGAGGCAGGGAGTGAGGACTGTGGGGATGTCGGAGATTGACGTGGTGGGACAGACCGGGGAGAGCGTGAAGCGCGACGGGGTGAGCGTGGGGGAGGTTGTGATGAGAGGTGGGTGCGTGATGTTGGGATACCTTAAAGACCCCGAAGGAACCGCGAGTTGTTTGAAAAACGGGTGGTTCTACACGGGGGATGTCGGAGTGATGCATGAGGACGGGTATTTGGAAATTAAGGACAGGTCAAAGGACGTGATCATCAGCGGCGGCGAGAACCTGAGCAGTGTGGAGGTGGAATCGATTTTGTACGGACACCCGGCGGTGGTGGAGGCTGCGGTGGTGGCGCGACCGCACGAGTATTGGGGAGAGACACCGTGCGCATTCGTGAGCTTGAAGGCGGGGTTGACAAAGAAAGAGAAACCCAGTGAGGAGGACATAATAAAGTACTGCAGGGAAAAGATGCCGCATTATATGGTTCCGAAGACGGTGGTTTTCAAGGATGAACTTCCGAAGACATCGACGGGGAAGATCCAGAAGTTTGTCCTGAGACAGATTGCGAAGGAGCTGGGGTCCTTGACCCAAAGTCGAATCTGA 1662 0.5794 MDQLKPSAANSSPLTPLGFLDRAATVYGDVPSIVYNHTTFTWDQTRRRCLQLASAISSLGIRRGSVVSVVAPNIPAMYELQFSIPFAGAVLNNINLRLDARTISIILCHANSTLVFVDCGSRDLVLEALSLFPKHHTQRPLLVLIADDSVENTNVSSTGDFVDTYEGLVSKGDPNFEWVRPKSEWDPMILNYTSGTTSSPKGVVHSHRGTFIVSVDTLIDWAVPKRPNYLWTLPIFHANGWSLPWGIAALGGTSICVRKFDAAIIYSLIKRHHVTHMCGAPVVLSMLTNSPDNKPLEKPVHILTAGAPPPAAVLHRTEALGFVVSHGYGLTETGGLVVSCAWKEKWNRLPAAERARLKARQGVRTVGMSEIDVVGQTGESVKRDGVSVGEVVMRGGCVMLGYLKDPEGTASCLKNGWFYTGDVGVMHEDGYLEIKDRSKDVIISGGENLSSVEVESILYGHPAVVEAAVVARPHEYWGETPCAFVSLKAGLTKKEKPSEEDIIKYCREKMPHYMVPKTVVFKDELPKTSTGKIQKFVLRQIAKELGSLTQSRI 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00510 553 Pfam AMP-binding enzyme 21 444 IPR000873 -
Phco3g00510 553 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
Phco3g00510 553 FunFam 2,3-dihydroxybenzoate-AMP ligase 439 546 - -
Phco3g00510 553 Gene3D - 440 552 IPR045851 -
Phco3g00510 553 PANTHER ACYL-ACTIVATING ENZYME 1 548 - -
Phco3g00510 553 SUPERFAMILY Acetyl-CoA synthetase-like 11 544 - -
Phco3g00510 553 Gene3D - 2 439 IPR042099 -
Phco3g00510 553 Pfam AMP-binding enzyme C-terminal domain 453 532 IPR025110 -
Phco3g00510 553 CDD ttLC_FACS_AEE21_like 12 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00510 Phco-Chr3 3953155 3954816 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00510 3 3953155 3954816 Phco3g00510 3 3953155 3954816 ECH