Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00509 ATGGATAAGCTAACCCCAAACCCTGCAAACTCAGTGCCTCTCACGCCACTCACCTTCTTGGAAAGAGCAGCAATCGTCTACGGGGATACACACTCCATCCTCTACGACCACATTTCCTTCACCTGGTCACAGACCCACCGTAGATGCCTCCAATTGGCTTCTTCCCTCACTTCTCTTGGTTTAGGACGTGGCCAAGTCATGTCTGTTCTCTCCCCCAACACTCCCTCAATGTATGAACTTCAGTTTGCAGTTCCCATGTCTGGCGCCATTCTCAACAATCTCAACCTCCGTCTCGACCCCCACGCGCTCTCCGTTCTCCTGCGCCATAGCGAATCAAAACTTGTCTTCGTCCACTCTCATTCGCTCTCTCTTATTCTCACCGCTCTTTCAAAATTCCCCCACACCACACCGCGTCCTTCCCTCATCCTTATCACAGACGACGGGGATGCGGATGCTGTGGCGGCGGCGCACGCAATCGACACCTACGAGACCCTTTTGAGCAGAGGCGACCCGAACTTCCAATGGGCCCAACCCAAGTCCGAGTGGGACCCAATAACCCTAAACTACACTTCCGGCACGACGGCGTCTCCCAAGGGCGTGGTCCACTCCCACCGAGCAACGTTCATTATGGCCCTCGACTCTCTCATCGACTGGTGCGTGCCAAAACAACCGGTTTACTTATGGACCCTACCGATATTCCACGCCAACGGGTGGGGCTTCCCGTGGGGGATTGCAGCGGTTGGCGGCACCAACGTCTGCACGCGTAAAACCAACGCACCGATAATCTACCGTTTGATCGAGTCTCACAACGTGACGCACATGTGCGCGGCGCCGGTGGTTCTCAACATGCTGCTCAGGAGAACAGAACCGCTGAAAAGTCCGGTTCATGTCCTCGCCGGAGGATCGCCGCCTCCGGCGTCAGTTCTCGCTCGCGCGGAGGAATTAGGGTTTGTGGTGAGCCACGGTTACGGGATGACGGAGACGCTGGGGGTGGTGGTGTCGTGCGCGTGGAAGAGGAAGTGGGATAGGCTTCCGGGGAGGGAGAGGGCACGGCTGCGCGCGCGGCAGGGGGTGAGAACTGCGGCGGTGTCGGAGGTGGACGTTGTGGATCCGGCGAGCGGAGTAAGCGTGAAGCGCGACGGCGTTACATCTGGGGAAGTAGTGGTACGAGGAGCGTGCGTGATGATGGGTTATCTGAAGGATTTGGAAGGTACGAGAAGTTGCGTGAGAGAAAATGGGTGGTTGTACACGGGGGACGTAGGGGTTGTGCATGGGGATGGCTATTTGGAGATAAAAGACAGGTCGAAGGACGTAATAATAAGTGGGGGAGAGAACGTGAGCAGCGTGGAGGTGGAGACGGTGTTGTATGCACACCCAGAGGTGAGAGAGGCGGCGGTGGTGGGGCGGCCGGACGAATTCTGGGGGGAGACACCGTGCGCGTTTGTGGAGCTGAAGGAGCGGTTGGAGCGGCTGCCGACGGAAAAGGAGGTGGTGGAGTTTTGCAGAGAGAGGTTGCCGCACTTCATGGTGCCAAAGACTGTGGTGTTCAAGGAGGCGCTGCCGAAGACTTCGACGGGTAAAATTCGGAAGCACGTACTGAGGAAGGAGGCGCAGGGTATGGGTTCCCTGGCCACACGCAGTCGCATGTAG 1650 0.577 MDKLTPNPANSVPLTPLTFLERAAIVYGDTHSILYDHISFTWSQTHRRCLQLASSLTSLGLGRGQVMSVLSPNTPSMYELQFAVPMSGAILNNLNLRLDPHALSVLLRHSESKLVFVHSHSLSLILTALSKFPHTTPRPSLILITDDGDADAVAAAHAIDTYETLLSRGDPNFQWAQPKSEWDPITLNYTSGTTASPKGVVHSHRATFIMALDSLIDWCVPKQPVYLWTLPIFHANGWGFPWGIAAVGGTNVCTRKTNAPIIYRLIESHNVTHMCAAPVVLNMLLRRTEPLKSPVHVLAGGSPPPASVLARAEELGFVVSHGYGMTETLGVVVSCAWKRKWDRLPGRERARLRARQGVRTAAVSEVDVVDPASGVSVKRDGVTSGEVVVRGACVMMGYLKDLEGTRSCVRENGWLYTGDVGVVHGDGYLEIKDRSKDVIISGGENVSSVEVETVLYAHPEVREAAVVGRPDEFWGETPCAFVELKERLERLPTEKEVVEFCRERLPHFMVPKTVVFKEALPKTSTGKIRKHVLRKEAQGMGSLATRSRM 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00509 549 Gene3D - 3 436 IPR042099 -
Phco3g00509 549 FunFam 2,3-dihydroxybenzoate-AMP ligase 436 541 - -
Phco3g00509 549 Pfam AMP-binding enzyme C-terminal domain 450 527 IPR025110 -
Phco3g00509 549 SUPERFAMILY Acetyl-CoA synthetase-like 9 540 - -
Phco3g00509 549 Pfam AMP-binding enzyme 22 441 IPR000873 -
Phco3g00509 549 PANTHER ACYL-ACTIVATING ENZYME 1 543 - -
Phco3g00509 549 CDD ttLC_FACS_AEE21_like 12 535 - -
Phco3g00509 549 Gene3D - 437 540 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00509 Phco-Chr3 3943225 3944874 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00509 3 3943225 3944874 Phco3g00509 3 3943225 3944874 ECH