Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00508 ATGGTGTGGGGACTCTTCCCCGTTGATCCTCTTTCAGGTGAAGATAAGTACTATATTTTCAAAACCGGAATTTACAAAGTTGGTCGAAAAGGTTGTGATGTGATAATCACTAAAGATAAAGGCGTTTCTCGGGTTCATGCAGAAATAATAGTTAATAAAATGAACCTGGTAAATCCTTTACCAAATGAATGTTCTCATTTGTCACCCAGTATACATATTAGAGATTGCTCCAAGTATGGGACATTTATTAGCAAGAATGTTGGGCCCAAGAAAAAAGTTCATGAGCTACCAAACAAACAAACACCACTAGAGGATGGCGACTTTGTTTCTTTTGGCACTGGTACTGCTACCTACAAGTTTTGCCATGTACCCCTCATTTTTTTCATCTGTTGCTCAAATAAAGTGGATCTTCAAGAGAAAATTTCATCAATTGGTGCTAGTTTTACTCATACCTTAGGTGAAGGGTGCACACATGTGCTGGTAGATCAACTCATGCCGTTGAAGAAGGATCTTGTTGATGCAGTCGTGGCAAAAAAATCTTGTGTTCTCCAAAATTGGCTTGAGTTTTTTGCTGAAAAGAATATCAGCACCGAAATTCCTAGCTGTCATTCATATATTCCAACAGTGTCAGTGGACGGAGAATCTATTAAAATTGCTGATCCCAGGTCGCGTGAAGATTGCTTGAAAGGATGCACATTTTTGTTGGAATCTGAGCATTTGTATAAATTTCGGGATCAGCTAAGATCTTTATTGGAGGTGGCTGGTGCAAAAGTTGTTTCCGCCGGAGATTTTTGTTCAAATAGTCAAGCTTCAAATTATGGAGAGGATAATCGTGTGGTTTGTGTCATCCCAGAAGGACCAGCATGCAAGACTAATCTTTTTGATAAACTGAGTTCCTTGCTTAGAGTTACTGAGATGGATATACTTTGTGCTGCTTTCAGTGGACAGCTAGATCTGTCTATCTTTAAATCACCATGCATACTTGTTTCGTCATCATGCTCTACGGATGAGACAATTGTAGCAGATTCAGATACTGAAGTTGAAACAGCCACATCAGCGCGCTCAACTGAGGCATTAAGCAACGACAATAATGTAAAATGTGGAAAAACAGAAGAAATATATGATGATTCTTGCACTTTGGATAAGAGAAAACATGATAGTATAGAGGCATCCTCAGATGATGTTTTAACCAGATTGCATGACATTAAACGTGCAAAAACAGAAACATCCTTAGATGGTGTTTCTGTCAGATCACATGCTACCAACTTCAGTAACGATAATGTTGGTGTTAAAGTAAAGAAAGACAAGGTTGATGATAATGAAACTGGAAATTCAGATGTTGTTTACAGCCAACATTTAATTGTTCGAGATAGAAACATACGGAGTAGCATAAGCACTACACCAGACAGCAGTTTTCCAAATTTTAAATGTTTCAGAAAGGCACACACTCAATCTGGTAATAGCTTTGACAATCTTGTTCCATTTGCAAAATATCCATACAAGGATTCTGACTGTGGGGATGATGAAGTGTCTGAGTTAGTGAAGGAGGAAAAAAGGCGAAAGAAAATGGAAGCTGTCGCAGATGACCTATTTAATAATGAGAAGACAAGGAAACGAGGCACAGTTGGTTCACGAGGCACTGTTGGTTCTCTTCGTAGCATTCTTTCTTCATGA 1674 0.3865 MVWGLFPVDPLSGEDKYYIFKTGIYKVGRKGCDVIITKDKGVSRVHAEIIVNKMNLVNPLPNECSHLSPSIHIRDCSKYGTFISKNVGPKKKVHELPNKQTPLEDGDFVSFGTGTATYKFCHVPLIFFICCSNKVDLQEKISSIGASFTHTLGEGCTHVLVDQLMPLKKDLVDAVVAKKSCVLQNWLEFFAEKNISTEIPSCHSYIPTVSVDGESIKIADPRSREDCLKGCTFLLESEHLYKFRDQLRSLLEVAGAKVVSAGDFCSNSQASNYGEDNRVVCVIPEGPACKTNLFDKLSSLLRVTEMDILCAAFSGQLDLSIFKSPCILVSSSCSTDETIVADSDTEVETATSARSTEALSNDNNVKCGKTEEIYDDSCTLDKRKHDSIEASSDDVLTRLHDIKRAKTETSLDGVSVRSHATNFSNDNVGVKVKKDKVDDNETGNSDVVYSQHLIVRDRNIRSSISTTPDSSFPNFKCFRKAHTQSGNSFDNLVPFAKYPYKDSDCGDDEVSELVKEEKRRKKMEAVADDLFNNEKTRKRGTVGSRGTVGSLRSILSS 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00508 557 Pfam FHA domain 25 112 IPR000253 GO:0005515
Phco3g00508 557 ProSiteProfiles Forkhead-associated (FHA) domain profile. 25 84 IPR000253 GO:0005515
Phco3g00508 557 SUPERFAMILY BRCT domain 128 188 IPR036420 -
Phco3g00508 557 Coils Coil 513 533 - -
Phco3g00508 557 PANTHER NIBRIN-RELATED 422 537 IPR040227 GO:0006302|GO:0007095|GO:0030870
Phco3g00508 557 CDD FHA_NBN 3 122 - -
Phco3g00508 557 Gene3D - 4 122 - -
Phco3g00508 557 FunFam Nibrin 5 121 - -
Phco3g00508 557 SUPERFAMILY SMAD/FHA domain 16 125 IPR008984 GO:0005515
Phco3g00508 557 CDD BRCT 127 188 - -
Phco3g00508 557 MobiDBLite consensus disorder prediction 531 557 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00508 3 3927265 3934487 Phco3g00508 3 3927265 3934487 ECH