Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00507 ATGGCTGCAGACCCTCAGAAAATTCACCCTGTCTATGATGTTGAGGCACCAAACCACCCTTCAGCACCCTTGGTGCCAAGAAGCATGTCTAAATCTGATGCAGGTGATCCAGAGAGAGGAGTGCAACAACAACAACAACAACATCCTCCACAACACACCATTCCTGTGATGCATTCCAGGCCACCCAAGAAAAGAAGAAGCTGCTGCTGCAGGTTTTTCTGTTGGTTGATAAGCATATTGCTGATTCTGATTGTGGCCATTGCCATCACAGTTGGGATACTATACCTTGTGTTCAGACCAAAGGTTCCAAAGTACTCAGTGGATGAGCTTAGAGTCACACAGTTTGATACCTCTGACAACAACAGTTTATCTGCCACTTTCAACTTGACAATCACTGCCAGAAACCCTAACAAGAAGATTGGAATATACTATGAAGGTGGCAGCCACATAAGTGCTTGGTACGTGGACACAAAATTATGTGAAGGGTCTTTACCAAAGTTCTACCAAGGTCACCGCAACACCACAGTTCTTAGTATCCCTCTCACTGGACAAACACAAGATGCTACTGGCCTGCAAAGTAGCCTTCAGCAGCAGCTGCAAGAAACTGGAAATGTGCCCCTCAATTTGAAGGTGAACCAGCCTGTGAGGATCAAGCTTGGGAAGTTGAAACTGTTCACAATCAAGTTCAGGATTAGGTGCAACATTGTGGTGGACAACCTTACTGCTAATAGTTCTATTAGAATTCAGAGCAGTAGTTGTAAATTCAGGTTTAGGCTGTGA 780 0.4474 MAADPQKIHPVYDVEAPNHPSAPLVPRSMSKSDAGDPERGVQQQQQQHPPQHTIPVMHSRPPKKRRSCCCRFFCWLISILLILIVAIAITVGILYLVFRPKVPKYSVDELRVTQFDTSDNNSLSATFNLTITARNPNKKIGIYYEGGSHISAWYVDTKLCEGSLPKFYQGHRNTTVLSIPLTGQTQDATGLQSSLQQQLQETGNVPLNLKVNQPVRIKLGKLKLFTIKFRIRCNIVVDNLTANSSIRIQSSSCKFRFRL 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00507 259 Gene3D - 96 241 - -
Phco3g00507 259 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 31 241 - -
Phco3g00507 259 MobiDBLite consensus disorder prediction 37 53 - -
Phco3g00507 259 Pfam Late embryogenesis abundant protein 130 234 IPR004864 -
Phco3g00507 259 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00507 Phco-Chr3 3924807 3925586 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00507 3 3924807 3925586 Phco3g00507 3 3924807 3925586 ECH
Phco11g01567 11 11941626 11942357 Phco3g00507 3 3924807 3925586 PCT