Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00385 ATGGCGACGGGGAAGACATCTCGGACGAGAAGTGCAGTGGCGAGTGCGAAGGAAAATGGACCTAAGCTTGAAGAAGGACTCAATCCCTTCAAGACTGAAAAATTCGACGCAGAGTCCTATGTGCAGTCCAATTGCTCCCTCAATGATAAGGAAATTAAGCAATTATGCACATATTTGGTGGACTTGAAGAAAGCATCTGCTGAGGAGATGCGTCGAAGTGTCTATGCTAATTATGCAGCCTTCATTCGAACATCCAAGGAGATATCAGATTTGGAGGGGGAGCTTTCATCTATTAGAAACCTTCTCTCCACACAAGCTGCCTTGATACATGGTTTGGCTGAAGGAGTTCACATCGATTCATTATCAATTTCAAATTCTGATGGTTTTTCTCTAAAGGCTGCTACATCAGATTCTGAAGATAAGGAGATATCAGACCTAGACAAATGGTTGGTAGAGTTTCCTGATCTCTTGGATGTTCTCTTGGCTGAAAGGCGTGTGGAAGAGGCTTTGGCTGCTCTTGATGAAGGAGAGCGTGTAGTTTCTGAGGCTAAAGAGATGAAATCTATCACCCCGTCAGTACTTTTGTCTCTACAGAATTCCATTGCTGAACGTAGGCAAAAGCTAGCCGATCAGCTAACTGAAGCTGCTTGTCAGCCCTCCACACGTGGTGCTGAGCTCCGTGCATCGGTTTCCGCCCTTAAAAGACTTGGAGATGGTCCCCATGCCCACAGCTTGCTACTTAATGCCCATCAGCAACGGTATCAATATAACATGCAAATTCTTCGACCATCAAGCACCTCATATGGTGGAGCATATACTGCTGCTCTAGCCCAACTGGTATTCTCAGTAGTTGCTCAAGCTGCTAGTGATTCTTTGGCTATTTTTGGTGAGGAGCCAGCTTATACTTCAGAACTTGTGATGTGGGCTACAAAACAAACAGAAGCCTTTGCTCTTCTGGTGAAAAGGCATGCATTAGCTTCATCAGCAGCTGCAGGAGGTTTAAGAGCTGCTGCAGAGTGTGTTCAAATAGCATTGGGTCATTGCTCATTGTTGGAAGCTCGTGGTCTGGCTCTTTGTCCCGTGCTGTTGAAACTTTTTAGGCCTAGTGTTGAGCAAGCACTAGATGCTAATTTGAAACGAATTCAAGAGAGTAGTGCTGCTTTGGCTGCGGCTGATGACTGGGTACTTACATACCCTCCTACAGCTAATCGTCAGAGTAGTAGGCCTTCAAGTATATCCATGAGTAATACAACAGCATTTCAACATAAGCTTACAAGCAGTGCCCATCGCTTCAATTTGATGGTCCAGGACTTCTTCGAGGATGTAGGACCACTGCTTAGCATGCAGTTGGGGGGCCAAGCCCTGGAGGGATTGTTTCAAGTATTTAACTCCTATGTGAACATGCTCATAAAAGCATTACCTGGATCAATGGAGGAAGAGGCGGGCTTTGAAGATTCTGGAAACAAAATTGTACGCATGGCTGAGACTGAGAACCAGCAAATTGCATTGCTAGCAAATGCCTCGTTACTAGCTGATGAACTACTTCCACGTGCAGCTATGAAGCTTTCCCCCATAAATCAAGCTTCCTACAATGATGATAATCGAAGACGAACCTCAGAAAGACAAAATCGTCATCCTGAACAAAGAGAATGGAGGAGAAGACTTGTTGGTTCAGTGGACAGATTAAAAGATACATTCTGTCGTCAACATGCACTGGACCTAATTTTTACTGAGGAAGGTGATAGTCATCTTACTGCTGACATGTATATAAATATGGATGGTAATGCCGAAGAAGTTGAATGGCTTCCATCTTTTATTTTTCAGGATCTTTTTGTAAAACTAAACCGAATGGCCAATATAGCAGCAGATATGTTTGTAGGGAGGGAAAGATTTGCTACGCTGCTCTTGATGAGACTTACAGAAACTGTTATGTTGTGGCTTTCAGAAGACCAGAGCTTTTGGGATGATATTGAGGAAGGGCCCAGGCCTTTAGGTCCCCTTGGTCTTCAACAGTTCTATTTGGATATGAAGTTTGTCGTATGTTTTGCTTCGCACGGTCGATACTTGTCGAGAAATTTGCAACGAATTGTCAATGAGATTATAACAAAAGCGATGGCGGCATTTTCTGCAACAGGGATGGATCCATATAGAGAACTGCCAGAAGACGAATGGTTTAACGACTTATGTCAAGATGCAATGGAGAGACTTAGTGGAAAGCCAAAAGAAATAAATGGGGACAAGGACCTTAACAGTCCTACTGCATCTGTCTCTGCTCAGTCAATTTCATCTGTCAGATCGCATAATAGTTCGTGA 2313 0.4388 MATGKTSRTRSAVASAKENGPKLEEGLNPFKTEKFDAESYVQSNCSLNDKEIKQLCTYLVDLKKASAEEMRRSVYANYAAFIRTSKEISDLEGELSSIRNLLSTQAALIHGLAEGVHIDSLSISNSDGFSLKAATSDSEDKEISDLDKWLVEFPDLLDVLLAERRVEEALAALDEGERVVSEAKEMKSITPSVLLSLQNSIAERRQKLADQLTEAACQPSTRGAELRASVSALKRLGDGPHAHSLLLNAHQQRYQYNMQILRPSSTSYGGAYTAALAQLVFSVVAQAASDSLAIFGEEPAYTSELVMWATKQTEAFALLVKRHALASSAAAGGLRAAAECVQIALGHCSLLEARGLALCPVLLKLFRPSVEQALDANLKRIQESSAALAAADDWVLTYPPTANRQSSRPSSISMSNTTAFQHKLTSSAHRFNLMVQDFFEDVGPLLSMQLGGQALEGLFQVFNSYVNMLIKALPGSMEEEAGFEDSGNKIVRMAETENQQIALLANASLLADELLPRAAMKLSPINQASYNDDNRRRTSERQNRHPEQREWRRRLVGSVDRLKDTFCRQHALDLIFTEEGDSHLTADMYINMDGNAEEVEWLPSFIFQDLFVKLNRMANIAADMFVGRERFATLLLMRLTETVMLWLSEDQSFWDDIEEGPRPLGPLGLQQFYLDMKFVVCFASHGRYLSRNLQRIVNEIITKAMAAFSATGMDPYRELPEDEWFNDLCQDAMERLSGKPKEINGDKDLNSPTASVSAQSISSVRSHNSS 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00385 770 Pfam Vps51/Vps67 30 109 - -
Phco3g00385 770 Gene3D - 269 373 IPR042560 -
Phco3g00385 770 Coils Coil 166 186 - -
Phco3g00385 770 MobiDBLite consensus disorder prediction 1 27 - -
Phco3g00385 770 FunFam Exocyst complex component EXO84B 269 373 - -
Phco3g00385 770 Gene3D - 136 258 IPR042561 -
Phco3g00385 770 FunFam Exocyst complex component EXO84B 137 260 - -
Phco3g00385 770 MobiDBLite consensus disorder prediction 526 549 - -
Phco3g00385 770 SUPERFAMILY Cullin repeat-like 140 374 IPR016159 -
Phco3g00385 770 PANTHER EXOCYST COMPLEX COMPONENT 8 11 763 IPR033961 GO:0000145|GO:0006887
Phco3g00385 770 Pfam Exocyst component 84 C-terminal 148 357 IPR032403 -
Phco3g00385 770 MobiDBLite consensus disorder prediction 748 770 - -
Phco3g00385 770 MobiDBLite consensus disorder prediction 736 770 - -
Phco3g00385 770 MobiDBLite consensus disorder prediction 533 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00385 Phco-Chr3 2822275 2831743 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00385 3 2822275 2831743 Phco3g00385 3 2822275 2831743 ECH