Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00237 ATGAAAAACCAACAAAACATGTCCTCTTCATCCTCATTGCCATTAACCATCTTCACACTGACCCTTCTCTCCTTTACCCTCGGTGCAAATGCTCAAGCCTGCACTGAAGCATTCTTCAAACTGGCACAACAAAAGAACATCTCAGACTGCAAGAGACTGCGCACTCTGGGGGCTGAGTTTGCATGGAACCTCCACGGCAATGGCTCCAGCAACTCCACCGTGGTTGACATCTTGTTCGGTGCCACACTGAATGCCCAACAAGGATGGATAGGGTGGGGGGTGAACCCTGGAAAAAGACCAGAGATGGTTGGGACCAGAGCCATCGTAGCCGTTAAACGCTCGGATGGAACGTGGGGTGTGGACACATACAACATCACGAAATATATCAGAAGCGGGTGCAATCTTCTGCCATCGAAAATTGGAATTGTGTTGAGTAAGTCGGTTGAGCAAGATGTTGATAACATGCACACCATGTATGTTAGATTGAGCCTTCCCTCTCCAGAGTATAACGTTACGAGACTGAACCATGTATGGCAAGTTGGATATGATATTGAAGGTGGCCATCCCCATGGACATCCAAAAACTCTCCGGAACGTCGACAGCACAGAGGTCATAGACTTGACTGATAGCAACGGTCGTGGCACTGGACAGTACCGGAGTTATCTTAGAACGATACATGGAGTCCTAAACATTATCGGGTGGGGAACCCTGTTGCCGATTGGAATTATAATTGCAAGGTACTTTCGGGTGTTTCCTTTCAAATGCGACCCACTGTGGTTTAACCTGCACATTGGTTGCCAATTAACTGGGTTTCTTGTTGGCACCACCGGATGGGCTATTGGACTAAGTCTCGGACATTCTTCTAGATACTACACCTTCCGCGATCATCGAACTTACGGCATTCTCATATTCGTTTTTAGTACAATTCAGATGTTGGCTTTTCGCTTAAAGCCAAAGCTGACGGATGATTACAGGAAGTATTGGAACATGTACCATCATTTTCTTGGTTATGGCCTTCTAGCTATCATAATCATAAACATATTCAAAGGAATTCGCATTTTGGAAGGAGGTGATGAATGGAAGTGGGGGTACATTGGAAATCTTGCTTTTCTGGGTGCCATCGCTTTTGGTTTGGAGGTTTACACGTGGATTCGCTTCTTCATATTGAAGCAGAAGCAGAAGCAAGAGCAGAAGCAGAAGCAGAAGCAAAACCAGACAGAACAAAGTCAGGAGGAGAAGCCATCAAAACCCAAGATGTTTGCCTAA 1266 0.4589 MKNQQNMSSSSSLPLTIFTLTLLSFTLGANAQACTEAFFKLAQQKNISDCKRLRTLGAEFAWNLHGNGSSNSTVVDILFGATLNAQQGWIGWGVNPGKRPEMVGTRAIVAVKRSDGTWGVDTYNITKYIRSGCNLLPSKIGIVLSKSVEQDVDNMHTMYVRLSLPSPEYNVTRLNHVWQVGYDIEGGHPHGHPKTLRNVDSTEVIDLTDSNGRGTGQYRSYLRTIHGVLNIIGWGTLLPIGIIIARYFRVFPFKCDPLWFNLHIGCQLTGFLVGTTGWAIGLSLGHSSRYYTFRDHRTYGILIFVFSTIQMLAFRLKPKLTDDYRKYWNMYHHFLGYGLLAIIIINIFKGIRILEGGDEWKWGYIGNLAFLGAIAFGLEVYTWIRFFILKQKQKQEQKQKQKQNQTEQSQEEKPSKPKMFA 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00237 421 CDD Cyt_b561_FRRS1_like 219 380 - -
Phco3g00237 421 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 17 399 - -
Phco3g00237 421 SMART 561_7 225 351 IPR006593 -
Phco3g00237 421 Coils Coil 388 412 - -
Phco3g00237 421 MobiDBLite consensus disorder prediction 397 421 - -
Phco3g00237 421 Gene3D - 209 396 - -
Phco3g00237 421 Pfam Protein of unknown function (DUF568) 102 207 IPR045265 -
Phco3g00237 421 PIRSF UCP037471 5 414 IPR017214 -
Phco3g00237 421 ProSiteProfiles Cytochrome b561 domain profile. 190 387 IPR006593 -
Phco3g00237 421 ProSiteProfiles DOMON domain profile. 56 181 IPR005018 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00237 Phco-Chr3 1731548 1733841 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00237 3 1731548 1733841 Phco3g00237 3 1731548 1733841 ECH