Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00226 ATGATTGAAACTAGGCCCTGCTTTCCCCGAATTCATTATTGTCTCGAAATGAAACCAATCAGCGTTTCTTGGCTCTTTTCCCTCAACCACGCTTCACCCATCAACTCTATAAAATCCACACCCTCCCTTCTCAACCAAACTAACTGCAACTTTTTCTTTCTCTCATCTATCTGCTCTGATTCTGCCCAGAATCAGATCATGGCTCCTCTCGCATTCTCCTTCTTCTTCCTTCTTGTCTCATTCTTTTCTTCATCATCAGAAGCGGGGTCCGTAGGAATAAACTATGGAAGGATTGCGAACGACCTACCTACACCGGCGAAGGTGGTGGAGCTTCTGAAGAGTCAGGGGCTGAACCGTGCAAAGCTGTACGACACCGACGCCACAGTTTTAACGGCGTTTGCGAACTCAGGAATCAAGGTGGTGGTTGCCATGCCAAACGAGCTTCTCTCGAACGCCGCTGCGGACCAGTCCTTCACTGACGCATGGGTGAAAGATAACATCTCCAAGTACTACCCCGCCACGCAAATCGAAGCCATCGCTGTGGGCAACGAAGTGTTCGTGGACCCCAACAACACCACCAAGTTCCTCGTTGCGGCCATGAAGAACGTGCACGCTTCCTTAACCAAGTACAGCCTCGACACGAACATCAAAATCTCCTCTCCCATCGCACTCTCCGCGCTCCAAACCTCCTTCCCCGCCTCATCCGGTTCCTTCAAAACCGAACTAGTCGAACCGGTTATTAAACCCATGCTCGACCTCCTCCGCCAAACCGGCTCCTACCTCATGGTGAACGCGTACCCGTTTTTCGCTTACTCAGCAAACGCTGACAAAATCTCCTTGGACTACGCGCTGTTCAAGGATAACGCCGGCGTGGTTGATTCCGGTAATGGTTTGAAATACACCAACCTTTTCGACGCCCAAATCGACGCCGTTTTCGCTGCCATGTCAGCGCTTCAATACAACGACGTTAAGATTACAGTTTCCGAAACGGGTTGGCCTTCCGCGGGGGACTCGAATGAAATTGGAGCGGGCCCAGAGAATGCGGCGGAGTATAACGGGAACTTGGTACGGCGCGTGTTGGGCCAGAGTGGGACCCCGTTGAAACCCAATGACTCACTCGACGTTTTTCTCTTCGCTCTTTTCAACGAGAATCAGAAAACAGGACCCACTTCGGAGAGGAACTATGGGCTGTTTTACCCCAGCGAGAAGAAGGTTTATGATATTCCGCTGAAGGCAGAGGGTGTTACGGAGGCGCCGTCGTCGGGTGTGGGGAAGAGCCAGGTTCCGGTGAGTGGGGACGTATCGACGACGTCGCATGAGGGTCAGACATGGTGCGTGGCGAATGGCGGTGCTTCCGAGGAGAAGCTTCAGAACGGTCTTAACTACGCTTGCGGAGAGGGTGGAGCTGATTGCAGTCCCATTCAACCAGATGCCACGTGTTACAATCCTAACACTTTGGAGGCCCATGCTTCTTACGCTTTCAACAGTTACTATCAGAAGAAGGCACGTGCCGCTGGCACCTGCGATTTTGGTGGAACCGCCTATGTTGTCACCCACCCTCCTAAGTATGGGACCTGCGAATTTCCCAGTGGATACTGA 1599 0.5228 MIETRPCFPRIHYCLEMKPISVSWLFSLNHASPINSIKSTPSLLNQTNCNFFFLSSICSDSAQNQIMAPLAFSFFFLLVSFFSSSSEAGSVGINYGRIANDLPTPAKVVELLKSQGLNRAKLYDTDATVLTAFANSGIKVVVAMPNELLSNAAADQSFTDAWVKDNISKYYPATQIEAIAVGNEVFVDPNNTTKFLVAAMKNVHASLTKYSLDTNIKISSPIALSALQTSFPASSGSFKTELVEPVIKPMLDLLRQTGSYLMVNAYPFFAYSANADKISLDYALFKDNAGVVDSGNGLKYTNLFDAQIDAVFAAMSALQYNDVKITVSETGWPSAGDSNEIGAGPENAAEYNGNLVRRVLGQSGTPLKPNDSLDVFLFALFNENQKTGPTSERNYGLFYPSEKKVYDIPLKAEGVTEAPSSGVGKSQVPVSGDVSTTSHEGQTWCVANGGASEEKLQNGLNYACGEGGADCSPIQPDATCYNPNTLEAHASYAFNSYYQKKARAAGTCDFGGTAYVVTHPPKYGTCEFPSGY 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00226 532 Gene3D - 437 528 - -
Phco3g00226 532 FunFam Glucan endo-1,3-beta-glucosidase 4 438 531 - -
Phco3g00226 532 Pfam X8 domain 443 514 IPR012946 -
Phco3g00226 532 FunFam Glucan endo-1,3-beta-glucosidase 3 90 413 - -
Phco3g00226 532 SUPERFAMILY (Trans)glycosidases 91 408 IPR017853 -
Phco3g00226 532 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 78 516 IPR044965 GO:0004553|GO:0005975
Phco3g00226 532 MobiDBLite consensus disorder prediction 420 435 - -
Phco3g00226 532 Gene3D Glycosidases 89 416 - -
Phco3g00226 532 SMART X8_cls 443 528 IPR012946 -
Phco3g00226 532 MobiDBLite consensus disorder prediction 416 435 - -
Phco3g00226 532 Pfam Glycosyl hydrolases family 17 91 408 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00226 Phco-Chr3 1648046 1650280 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00226 3 1648046 1650280 Phco3g00226 3 1648046 1650280 ECH