Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00213 ATGATTTTGATACTGTATGTGTCTGTCTGCAAAGTAAGAGTGGCCATGGAACTCTGCACTCGAACCTTCACAAGTTTTCTTCTTTCCAACTCTTTTTTTTCTTCAAACACTCTTCTTCTCCCTGCTAATGCCAAAGCTACTGTCTTCAAATTCAATTCCCTAAAATTGTCATCCTTTTCGCCTCATATTCATCTCTTTCAACCCTTTCAGTTTCCTCACACTTCTTTTTCTTCTCCCTTCACAGTCTCAGCTACTTCTTCCTCTTCCTCTTCCTCAGTTGCAGTTGGCACAGAACAGGACCGTCTCCCGGCAGAACTGAATGTCACAGAAACAGAGCAGCTCAATTCCACTGTTAAATTGCATGTGGAGGTGCCACCATTGGTATGTGAGGATTGTTACAAAAGGGTCATAGCAGAGTTTATGAAGCAAGCAAAGGTTCCTGGATTTCGCCCTGGAAAGAAAGTTCCTGAAGACATTCTTATTAGTTATGTTGGGAGACAAAATGTCCAGAAGGCTACTATTGAATCTATATTAAGAAGGACACTTTCACATGCTATGACATCGGTTACTGGGAGGGCTTTGCAGGACTCAGTACGAATAGTTACCAAGTTTCCTGAGATGGAGAAGACATATTCTTCTCTTGGATCTCTTAGATATGACGTCCTTGTTGATATTGCACCAGAAATCAAATGGATTCCTGATAATAATGCATACAAAAATTTAAAGATTGTTGTTGAGATAGATAGTGATATAGATGCTAAAATAACATCTGAACAAGAATTTAAAAGGCGTTACAAGTCCATTGGTGCACTGAAAGTAGTTGCTGACAGAGGGTTACAGGTTGGTGATGTTGCTCTCCTTGACATCTCAGCAACAACCATTGATCAAGACGAATCAAATGTTAAAAATATTCCTTCTGCTGAAAGTAAAGGCTTTAATTTTGATACAGAAGACGGGGACAAGGTATTACCAGGTTTCCTTGATTCAATAATTGGAATTCATCGTGGTGAATCAAAATCTTTTCCTCTTGTATTTCCTGAAACATGGACGCAAGAAAATCTTCGTGGTGTTCATGCTCAGTTTAATGTTGAATGCAAAGAACTTTTTTACAGAGATTTGCCAGAACTGGATGATTCTATTGCTGATAAGCTTCTCCCTGGATGCAGCACAGTGGAGCAGGTCAAAGACTTGTTGTTACAGAGATGCCTAGAGGTGGAGCAAACAGCTAGAGAACAAGCAACTGATAATGCTATCTTAGATCAGATTACTAAGATGGTAGAGGTTGATATACCTCAATCCTTGTTCGAGGAACAAGGTAGGCAGCTTTATGGAGCCAACCTATTAGAAATACAGGCAAAAATGAAACTAAATGAGCAACAGCTGGCATCTCTCTCGAGTCCAAAGGCTGTGAACCAATATCTTGAGCATCAGAAGGAAAATATAACAAATTTGATAAAACAGAATCTGGCAGTGGGTGATATATATAGGCGTGAAAATCTGCAGTTTGCTACCGAGGACCTCGTCAAAGAGGTTGAGAATTCCATTGCTGAATTCAAACGTCAAAATCAAGAATATGATGAGGAACGGGTGAAGGATCAGGTTCAAGAAATACTAGAAGGAGCTAAAGTGCTTGAATGGTTGAGAGAACACGCAGAGATTCAATATATAACTAGATGA 1677 0.3965 MILILYVSVCKVRVAMELCTRTFTSFLLSNSFFSSNTLLLPANAKATVFKFNSLKLSSFSPHIHLFQPFQFPHTSFSSPFTVSATSSSSSSSVAVGTEQDRLPAELNVTETEQLNSTVKLHVEVPPLVCEDCYKRVIAEFMKQAKVPGFRPGKKVPEDILISYVGRQNVQKATIESILRRTLSHAMTSVTGRALQDSVRIVTKFPEMEKTYSSLGSLRYDVLVDIAPEIKWIPDNNAYKNLKIVVEIDSDIDAKITSEQEFKRRYKSIGALKVVADRGLQVGDVALLDISATTIDQDESNVKNIPSAESKGFNFDTEDGDKVLPGFLDSIIGIHRGESKSFPLVFPETWTQENLRGVHAQFNVECKELFYRDLPELDDSIADKLLPGCSTVEQVKDLLLQRCLEVEQTAREQATDNAILDQITKMVEVDIPQSLFEEQGRQLYGANLLEIQAKMKLNEQQLASLSSPKAVNQYLEHQKENITNLIKQNLAVGDIYRRENLQFATEDLVKEVENSIAEFKRQNQEYDEERVKDQVQEILEGAKVLEWLREHAEIQYITR 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00213 558 SUPERFAMILY FKBP-like 274 377 - -
Phco3g00213 558 FunFam Chloroplast trigger factor 353 553 - -
Phco3g00213 558 Pfam Bacterial trigger factor protein (TF) 108 253 IPR008881 GO:0006457|GO:0015031
Phco3g00213 558 Hamap Trigger factor [tig]. 106 554 IPR005215 GO:0015031
Phco3g00213 558 Gene3D - 104 229 IPR036611 GO:0006457|GO:0015031
Phco3g00213 558 Gene3D - 267 374 IPR046357 GO:0003755
Phco3g00213 558 SUPERFAMILY Trigger factor ribosome-binding domain 107 234 IPR036611 GO:0006457|GO:0015031
Phco3g00213 558 Coils Coil 508 528 - -
Phco3g00213 558 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 32 540 IPR005215 GO:0015031
Phco3g00213 558 Pfam Bacterial trigger factor protein (TF) C-terminus 390 547 IPR008880 GO:0006457|GO:0015031
Phco3g00213 558 FunFam Trigger factor 272 374 - -
Phco3g00213 558 FunFam Trigger factor 106 229 - -
Phco3g00213 558 Gene3D - 237 553 IPR037041 GO:0006457|GO:0015031
Phco3g00213 558 SUPERFAMILY Triger factor/SurA peptide-binding domain-like 376 554 IPR027304 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00213 3 1549701 1555221 Phco3g00213 3 1549701 1555221 ECH