Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00210 ATGGCAAACGAAAACGAACCCGCGAAGCTGCTGTTGCCATATCTTCAACGCGCCGATGAATTGCAAAAGCACGAACCACTCGTCGCTTATTACTGTCGATTATATGCGATGGAACGGGGGTTGAAGATTCCGCAAAGTGAGCGCACAAAGACCACCAATGCTCTTCTCGTCTCGCTCATGAAGCAGCTTGAGAAGGATAAAAAGTCCATCCAGTTGGGGCCTGAGGACAATTTATATCTCGAGGGTTTTGCTTTGAATGTGTTTGGAAAGGCAGACAAACAAGACCGTGCTGGAAGAGCAGATTTGAATACAGCGAAAACATTTTATGCTGCCAGCATATTTTTTGAGATTCTTAATCAATTTGGAGCAGTTCAGCCTGATCTGGAGCAGAAACAGAAATATGCAGTGTGGAAAGCAGCTGATATAAGAAAAGCTTTGAAAGAAGGAAGAAAGCCCATAGCTGGTCCGCCTGCTGGTGATGAGGATCTGTCAATTCCATTCAGCTCTTCAAGTGATAGATATGACCTTGGGACTACTGAAACTACTGTTTCCAGTCCTGGACCAGCATCTGATTCATCACCTAGTTATCATAATCCTGTCGACTACCAGAATCCACCAGGCGTTCATCCGGCTTCTAAATTTCATGATACTGTTAATGAACAGCATTCTGCAAATATTCAACCATCTATGCAATATCATGATAGAGTGGATAACAACAAACATTCTTCTGTTGTTTCTCCATCATCTCACTCTTACACACCTGGAGTTTATCCTTCCCAAGACTATCATCCTCCTCCACCTTCCCATGACTATCATTCTCCTCCACCTTCCCAAGACTATCATTCTCCTCCACCTTCCCAAGACTATCATTCTCCTCCACCTTCCCAAGACTATCATCCTCCACCACCTTCCCAAGATTATCATCCTCCTCCACCATCCCAAGATTACCATCCTCCACCTGCCAGGTCAGAAAGTTCTTATTCTGAGCTTTACAACCATCAGCAATACTCATCGGAGAACTCACAGCATTTAGGGCCTAACTACCCTTCTCATGAAAATTCCTCCTATTCCTATCCCCATTTTCAGTCTTATCCAAGTTTTACAGATAGCAGCCTTCCATCAGTCCCATCAAACTATACTTATTATCAAGGGTCAGATGCTTCATATTCTTCCCAGTCGGCTCCGCTAACTACAAACCATTCAACAAGCGCTCAACACAGTTCCAGCAGCAGAAATGGAACTGTTGTGGAACCTAAATCAACTACTCAGACATACCAGTATGACAGTAACTACCAGCCAGCACCTGAAAAAATAGCGGAGGCACACAAGGCTGCAAGATTTGCTGTTGGAGCACTGGCATTTGATGATGTCTCAATTGCAGTAGACTACTTGAAGAAATCACTTGAATTGCTGACAAATCCATCCGCTAGCCAGTAA 1437 0.4405 MANENEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQSERTKTTNALLVSLMKQLEKDKKSIQLGPEDNLYLEGFALNVFGKADKQDRAGRADLNTAKTFYAASIFFEILNQFGAVQPDLEQKQKYAVWKAADIRKALKEGRKPIAGPPAGDEDLSIPFSSSSDRYDLGTTETTVSSPGPASDSSPSYHNPVDYQNPPGVHPASKFHDTVNEQHSANIQPSMQYHDRVDNNKHSSVVSPSSHSYTPGVYPSQDYHPPPPSHDYHSPPPSQDYHSPPPSQDYHSPPPSQDYHPPPPSQDYHPPPPSQDYHPPPARSESSYSELYNHQQYSSENSQHLGPNYPSHENSSYSYPHFQSYPSFTDSSLPSVPSNYTYYQGSDASYSSQSAPLTTNHSTSAQHSSSSRNGTVVEPKSTTQTYQYDSNYQPAPEKIAEAHKAARFAVGALAFDDVSIAVDYLKKSLELLTNPSASQ 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00210 478 MobiDBLite consensus disorder prediction 164 200 - -
Phco3g00210 478 Pfam Vta1 like 13 148 IPR039431 -
Phco3g00210 478 Gene3D - 4 152 IPR023175 -
Phco3g00210 478 MobiDBLite consensus disorder prediction 259 318 - -
Phco3g00210 478 MobiDBLite consensus disorder prediction 319 356 - -
Phco3g00210 478 Gene3D Immunoglobulin FC, subunit C 434 473 - -
Phco3g00210 478 Pfam Vta1 C-terminal domain 435 472 IPR041212 -
Phco3g00210 478 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG 293 474 IPR044538 GO:0032511
Phco3g00210 478 MobiDBLite consensus disorder prediction 241 256 - -
Phco3g00210 478 MobiDBLite consensus disorder prediction 239 356 - -
Phco3g00210 478 MobiDBLite consensus disorder prediction 148 214 - -
Phco3g00210 478 MobiDBLite consensus disorder prediction 386 428 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00210 3 1531212 1533647 Phco3g00210 3 1531212 1533647 ECH