Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00160 ATGATTTGGCAAAAAGAAAGATCCACGACAAAAGGGATGATGATGATGGAGTTGGTGTCTTCCAGAGTTGTGTTTTTGTTTGTGTCGGTTTTCGTGATGTGGGTTCATGTGAATTTAGCAGAAGGTGAAAATGGCCATGGTGGTATTAGGAACTACATTAGTTGGGAAGATATGCAGGTTGATGAGCAAAGGTTGACCTTGAAGCGCCATGACGATGTTCGAATTATTGTTGTAAACAAATATGGTGGGGGACACTCCAAAACTGTTCAAGGTGCTGTGGATATGGTTCCTGTTAATAACAAACATAGGGTGAAAATTTACATTTATCCAGGAATTTACAGAGAGAAAGTGCGTGTGCCTGTGAACAAGCCTTATGTATCATTCGTAGGGAAAAGAAATCAAACAGCAAGTCCTGTTATTACTTGGAACAGTAAGTCATCTGATAGAGGCACAAATGGTCAGGCATTGGGCACCTTTGATACAGCAACAGTTGGAGTGGACTCAGATTATTTCTGTGCAACTGGGATCACTTTTGAGAACTCAGTGATTGCAACGGCTGGTGTAAAAGGGATGCAAGGAGTGGCACTGAGGGTGAACAGTCAAAGAGCCATGTTCTATCAAGTGAGGATTAAGGGAGCACAGGACAGTCTCTTGGACAACACAGGAAATCATTACTTCTTAGAGTGTGAAATCCTAGGAAAAGTTGACTTTATCTTTGGCAGTGCAAAATCACTCTATGAGAATTGTCTTCTTCAGTCAATAACGGACAACTTTGGAGCAATAGCAGCACATCATAGGAATTCACCAAATGAAGACACAGGTTTTTCTTTTGTAGGGTGCAATATCAGAGGAAGTGGCAGAGTATACCTTGGCAGAGCATGGGGGAACTACTCAAGAATTATATACTCCAAATGTAATATGGATGACATTATCATTCCTGAAGGATGGTCAGATTGGAATCAATCAGATAGAAAGAAGACTGCAGTGTTTGGTGAGTATCTATGCGATGGAAAAGGAGCAGATAGAAGCAACAGGGCACCTTGGTCAAAGTCATTCAGCTATAATGAAGCAGCACCTTTCCTTCAGAAGAGTTTCATAGATGGAGACGAGTGGCTGAGACTATAG 1125 0.4151 MIWQKERSTTKGMMMMELVSSRVVFLFVSVFVMWVHVNLAEGENGHGGIRNYISWEDMQVDEQRLTLKRHDDVRIIVVNKYGGGHSKTVQGAVDMVPVNNKHRVKIYIYPGIYREKVRVPVNKPYVSFVGKRNQTASPVITWNSKSSDRGTNGQALGTFDTATVGVDSDYFCATGITFENSVIATAGVKGMQGVALRVNSQRAMFYQVRIKGAQDSLLDNTGNHYFLECEILGKVDFIFGSAKSLYENCLLQSITDNFGAIAAHHRNSPNEDTGFSFVGCNIRGSGRVYLGRAWGNYSRIIYSKCNMDDIIIPEGWSDWNQSDRKKTAVFGEYLCDGKGADRSNRAPWSKSFSYNEAAPFLQKSFIDGDEWLRL 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00160 374 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 66 373 - -
Phco3g00160 374 SUPERFAMILY Pectin lyase-like 75 372 IPR011050 -
Phco3g00160 374 Gene3D - 73 374 IPR012334 -
Phco3g00160 374 FunFam Pectinesterase 71 374 - -
Phco3g00160 374 Pfam Pectinesterase 76 369 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00160 Phco-Chr3 1031148 1034252 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00160 3 1031148 1034252 Phco3g00160 3 1031148 1034252 ECH