Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00156 ATGGGATCCACTTCCACTGCATCAGAAGCTTTCAGAAGCCTTTGCCATACTCTCATCTCATCTCCTCCAGCAACAATAAACCACTTCAAAGGTTGTGATATTGAATCAAGGAAAATACTTCCGAGGGTAAAATCGCTGAGCTGCATGGCCAACAATGATGTAAAGGAGCCCTTGCTGTCAGGATCACTGGATGAAACTCAAAAGGTTAAACGGCAGTTAAACAGGAGAAGGTTACACCGCTCTAGAAGTGCTCCTCACACAGATGGTGTTCCTTCTGAGACACAAAGCAAAGAATCAACTCCTCGAACTGCATCCATATTTCAGAATTTACACCCAAATTTTAAAAGAGTGGCTATCTACCTCGCAGTATATTTAGGTGTAGGTGCTTTAATCTTCTTCCTTGTCGGGGACCAGATTAAGGGGACGAAAACAAATGGAATTCTTGATGCTTTATACTTTACAATTGTTACAATGACCACTGTTGGATATGGAGATCTTGTGCCAAATAGCCACCTAACAAAACTATTTGCATGTGCCTTTGTTTTCTCTGGGATGGCATTGATCGGAATAACTGTAAGCAAAGCAGCAGACTACTTAGTTGAGAAACAGGAACTTTTGCTAGTTAAAGCTATGCACATGCACCAAAAAGTTGGTTTAACTGGAATGTTAAGGGAGATTGAGACCAACAAAACAAGATACAAACTTTTTGTAGTCTTTTTCCTTCTTTTGATTCTGATCATTGCGGGGATAATTTTTTTGGTCACAGTTGAGAAATTGGATGTTATTGATGCATTCTACTGTGTTTGTTCTACAATCACAACCCTCGGCTATGGAGACAAAAGTTTCTCAACTCAAGCAGGAAGAATATTTGCAGTGTTTTGGATATTGACAGGTACTATTACTTTAGCTCAGTTTTTCCTCTACATTGCAGAGCTAAACAGTGAAATCAGACAAAAGGAACTTGTGAAGTGGGTGCTTACAAGGAAAGTGACCAATTTAGATTTGGAGGCTGCAGATCTTGATGAGGATGGGAGTGTTGGGGCTGCTGAATTTGTTATTTATAAGCTGAAAGAGATGGGGAAGATTAGTGAAGAAGATATATCACTTGTGATGCAGGAGTTTGAACAGCTAGATGTTGATGATTCTGGTACACTGTCAACTTCTGATATAACACTTGCTCAGTCATCTTAG 1191 0.398 MGSTSTASEAFRSLCHTLISSPPATINHFKGCDIESRKILPRVKSLSCMANNDVKEPLLSGSLDETQKVKRQLNRRRLHRSRSAPHTDGVPSETQSKESTPRTASIFQNLHPNFKRVAIYLAVYLGVGALIFFLVGDQIKGTKTNGILDALYFTIVTMTTVGYGDLVPNSHLTKLFACAFVFSGMALIGITVSKAADYLVEKQELLLVKAMHMHQKVGLTGMLREIETNKTRYKLFVVFFLLLILIIAGIIFLVTVEKLDVIDAFYCVCSTITTLGYGDKSFSTQAGRIFAVFWILTGTITLAQFFLYIAELNSEIRQKELVKWVLTRKVTNLDLEAADLDEDGSVGAAEFVIYKLKEMGKISEEDISLVMQEFEQLDVDDSGTLSTSDITLAQSS 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00156 396 SUPERFAMILY EF-hand 298 392 IPR011992 -
Phco3g00156 396 MobiDBLite consensus disorder prediction 87 102 - -
Phco3g00156 396 PRINTS Two pore domain K+ channel signature 156 184 IPR003280 GO:0005267|GO:0016020|GO:0071805
Phco3g00156 396 PRINTS Two pore domain K+ channel signature 273 282 IPR003280 GO:0005267|GO:0016020|GO:0071805
Phco3g00156 396 Pfam Ion channel 120 200 IPR013099 -
Phco3g00156 396 Pfam Ion channel 241 312 IPR013099 -
Phco3g00156 396 Gene3D - 215 325 - -
Phco3g00156 396 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 122 369 IPR003280 GO:0005267|GO:0016020|GO:0071805
Phco3g00156 396 FunFam Two-pore potassium channel 1 215 323 - -
Phco3g00156 396 MobiDBLite consensus disorder prediction 65 102 - -
Phco3g00156 396 Gene3D - 111 205 - -
Phco3g00156 396 SUPERFAMILY Voltage-gated potassium channels 212 332 - -
Phco3g00156 396 FunFam Calcium-activated outward-rectifying potassium channel 1 111 206 - -
Phco3g00156 396 SUPERFAMILY Voltage-gated potassium channels 112 216 - -
Phco3g00156 396 ProSitePatterns EF-hand calcium-binding domain. 378 390 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00156 Phco-Chr3 1010519 1013141 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00156 3 1010519 1013141 Phco3g00156 3 1010519 1013141 ECH