Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00154 ATGGCGCCGGTGGCAGCGAGAAGCGCAGGCGCCGTTGGTGTTGGTGTTGCAATCTTCATCTCAGTTGCTCTCACCACGTATTTAATCTGTGACCGCCGCTCTAAGAAGAAGAACATTCCAAGGAAGAATGGGCTCGTGGAGGCCATCGGTAACACCCCTCTCATTCGGATCAACAGCCTCTCTGCCGCCACTGGTTGTCAAATTCTCGGCAAGTGCGAGTTTTTGAATCCCGGAGGCAGCGTCAAAGACCGTGTTGCTCTTCAAATCATTCAAGAGGCTCTGGAATCTGGCCAGCTACGTCCAGGTGGAATAGTCACCGAAGGGAGTGCTGGAAGTACTGCTATTAGCATTGCTACTGTTGCTCCTGCTTATGGGTGCAAAACCCACGTGGTTATACCAGATGATGCTGCCATTGAGAAGTCTCAAATACTTGAAGCCCTTGGGGCAACTGTTGAAAGAGTGCGACCAGTGTCCATTACTCACAAAGACCATTTTGTAAATATCGCAAGAAGACGGGCATCTGAAGCAAATGAGTTTGCGCAGAAACAGAGAAATTCACAACTGAATGGCAAGGAGGACACTGCAAAAATAAATGGTGATGAATCTGATGGACACAATTATAGCTCTCTGTTTCCTAGTGACTGTCAAGGTGGGTATTTTGCTGATCAGTTTGAGAACTTAGCGAACTTCAGGGCCCATTACAACGGTACAGGGCCAGAGATTTGGGAACAGACCAATGGAAAGTTAGATGCATTTGTTGCAGCAGCAGGCACTGGTGGCACTGTGGCTGGTGTTTCTACGTTTCTCCAGGAAAAGAATCCAGACATCAAATGCTTCCTCGTAGATCCTCCAGGCTCTGGTTTGTTTAATAAGGTAACTCGGGGAGTGATGTACACCAAAGAGGAGGCTGAAGGAAGAAGACTTAAGAATCCATTCGACACTATAACAGAAGGAATTGGAATTAACAGGATAACAAAGAATTTTGCGATGGCAAAACTTCATGGCGCCTTTAGAGGCACCGATCGGGAGGCTGTTGAAATGGCAAGGTTTCTTTTGAAGAACGATGGGCTCTTCCTTGGGAGTTCTTCAGCAATGAACTGTGTCGGAGCAGTTAGAGTAGCACAGGCAATTGGTCCTGGTCATACAATTGTGACCATACTCTGCGATAGTGGAATGAGACATTTGAGCAAGTTCTGTAATGCTGAATACTTGTCTGAGCTGGGTTTGACACCGAAAGCAGATGGATTGGAGTTCTTAGGGATTGAATGA 1269 0.4697 MAPVAARSAGAVGVGVAIFISVALTTYLICDRRSKKKNIPRKNGLVEAIGNTPLIRINSLSAATGCQILGKCEFLNPGGSVKDRVALQIIQEALESGQLRPGGIVTEGSAGSTAISIATVAPAYGCKTHVVIPDDAAIEKSQILEALGATVERVRPVSITHKDHFVNIARRRASEANEFAQKQRNSQLNGKEDTAKINGDESDGHNYSSLFPSDCQGGYFADQFENLANFRAHYNGTGPEIWEQTNGKLDAFVAAAGTGGTVAGVSTFLQEKNPDIKCFLVDPPGSGLFNKVTRGVMYTKEEAEGRRLKNPFDTITEGIGINRITKNFAMAKLHGAFRGTDREAVEMARFLLKNDGLFLGSSSAMNCVGAVRVAQAIGPGHTIVTILCDSGMRHLSKFCNAEYLSELGLTPKADGLEFLGIE 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00154 422 CDD CBS_like 50 396 - -
Phco3g00154 422 FunFam Cysteine synthase 231 395 - -
Phco3g00154 422 FunFam Cysteine synthase, putative 49 78 - -
Phco3g00154 422 MobiDBLite consensus disorder prediction 178 203 - -
Phco3g00154 422 Gene3D - 49 395 IPR036052 -
Phco3g00154 422 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 41 403 IPR036052 -
Phco3g00154 422 Gene3D - 79 230 IPR036052 -
Phco3g00154 422 PANTHER CYSTATHIONINE BETA-SYNTHASE 44 404 - -
Phco3g00154 422 MobiDBLite consensus disorder prediction 179 193 - -
Phco3g00154 422 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 71 89 IPR001216 GO:0006535
Phco3g00154 422 Pfam Pyridoxal-phosphate dependent enzyme 48 389 IPR001926 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00154 Phco-Chr3 1003931 1006179 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00154 3 1003931 1006179 Phco3g00154 3 1003931 1006179 ECH