Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00142 ATGGTGGCGAATATCAGGCAAAGTTCTGCTAAATCTCCAAATCCTAAAAAACCAGCGGTTGGAGAGATTGATACCAGTCCACCTTTTCAGTCTGTTAAAGATGCGGTTTCTCTATTTGGTGAAGGTGCTATATCTGGTGAAAAACCTGTCATTAAGAAGGCAAAATCTTATTTTGCTCAGAGTATATGGGCAAAGGAGTCACAACTTCACCTAGCCCGGAAAGAGCTGAAAAAATTAAAGGAACAAGTAAAGAATGCAGAAACTACCAAGGCTCAAGTCCTGGTGGAGCTTGAAAAGGCTAAAAGAGTGGTTGAGGATCTCTCACAAAAGCTTGAAGTTCTCATTGAATCCAGAGAAACAGCAATACAATCAACAGATGTTTCCAAAAGTCGAGCAAAACAGCTTAAAGAAGAAAAGTGTGGTGATCCGGATGGAACCAATGGTACTTGGAAAGAAGAGTTAGAAATTGCCGTTAAAAGTTATGCCTCTGTCGTTACAGAACTTGATGTTGCAAAGCAAGAACTGAGTAAAATTCGGCAGGGGTATGATTTATCCTTAGAAGTAAGAGTTTCTGCTTTCAAGCAAGCAGCAGAAGCGGAAGATGCAATGAAGGTGAACACCAAAAGAGCATCCGAACTATCTAAAGAAATTTTGGCTGTACTGGAATCAATTGATCAAATTAATGCTGAATCTGTCCAAGCACATTTGCTGCAAGAAGAGACATTAACCGAGCATAATGTTCTAAGACAATCATATGAAGCCACCCTTGAAGAATCGAGAAGGAATTTGCTTGATTTAAAGAAGGAATTTAGTCCAGGGCTTTCCAAAAATCTAGAATTGCAGCTGACTGAGACAATGAATGAAATAGGTGTTCTGCAAGAACAAATGGAAAATAGGAAGAAATCAGACCTGGATGCTTTGAGAAGTGTCACCCTGGATCTTGATGATGCTAAGGAATCACTGCAGAAAGTAGCAGGACAGGAGGACTCCCTTAGAATCATGGTGGAAGCTCTTAGGATGGATCTGGAGAATGTAAAAAGAGAACACACTGCATTGAAAGAGAAAGAACTCAAAACTGAATCCGCTGTTGAGAATCTGCGGGTAGAGCTCCAGAAAAGTGAGTCTGAACTTGAGGCATACTTGGCAGAAGAATCTAAAGGTAGAGGTGCATCAGAGGAAATGATTTTGAAATTGAACCAGTTGTTGACTGAAACTGAAAACGCTAGGAGGGAAACAGAAGATATGAAGAATGAGGCTGCGGAATTGAAGATGGAAGCTGTAGTCACTAAACTTGTTTTAGAAGATGCCGAAATAAAGCTTAAAGCAGCACTGCAAGAAGCAGAAGTAGCAAAAGCAGCCGAGGCAAGTGCTCTTGATCAGATCAGGGTCTTATCTGTGGGGACCAGTGCTTCTCTTTCATCATCCTCTGAATCAGGTGCAAGAATTACAATCTCAAGGGAGGAGTTTGAGTCCTTAGTTCATAAGGTTGAGGAGTCTGATAAATTAGCCGATATCAAAGTGGATGCTGCCAAAGCACAGGTGGAAGCTACAAAGGCTAGCGAAAATGAAGTTCTGAAAAGGTTAGAGGAAACTCAAAAGGAAATTGAGGATATGAAGACTGAAACACAGGAAGTCTTGAAAAGGGCTGATATGGCTGAAGCAGCAAAGAGAGCAGTGGAGAATGAACTCAGAAAGTGGCGTGAAAGAGAGCAGAAGAAAGTAGCAGAAGCTGCATCCAAAATATTGGCTGAAACACAGATGACACCAGAATTATCTCCTCAGCAGTATAGGATTCAAAAGCAGAATTCACTACCAAAGGTGGAGATGAGAAAGTTAGAAAAAGGGAAGGTGGCTGTTTCAAAGAAAGTTCTCTTGCCTAACATGAGTGGCATCTTTCACAGGAAAAAGAACCATGTTGAGGGAGGACCTTCTTCTTAG 1938 0.4123 MVANIRQSSAKSPNPKKPAVGEIDTSPPFQSVKDAVSLFGEGAISGEKPVIKKAKSYFAQSIWAKESQLHLARKELKKLKEQVKNAETTKAQVLVELEKAKRVVEDLSQKLEVLIESRETAIQSTDVSKSRAKQLKEEKCGDPDGTNGTWKEELEIAVKSYASVVTELDVAKQELSKIRQGYDLSLEVRVSAFKQAAEAEDAMKVNTKRASELSKEILAVLESIDQINAESVQAHLLQEETLTEHNVLRQSYEATLEESRRNLLDLKKEFSPGLSKNLELQLTETMNEIGVLQEQMENRKKSDLDALRSVTLDLDDAKESLQKVAGQEDSLRIMVEALRMDLENVKREHTALKEKELKTESAVENLRVELQKSESELEAYLAEESKGRGASEEMILKLNQLLTETENARRETEDMKNEAAELKMEAVVTKLVLEDAEIKLKAALQEAEVAKAAEASALDQIRVLSVGTSASLSSSSESGARITISREEFESLVHKVEESDKLADIKVDAAKAQVEATKASENEVLKRLEETQKEIEDMKTETQEVLKRADMAEAAKRAVENELRKWREREQKKVAEAASKILAETQMTPELSPQQYRIQKQNSLPKVEMRKLEKGKVAVSKKVLLPNMSGIFHRKKNHVEGGPSS 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00142 645 Coils Coil 433 453 - -
Phco3g00142 645 Coils Coil 196 216 - -
Phco3g00142 645 Coils Coil 363 383 - -
Phco3g00142 645 Coils Coil 62 117 - -
Phco3g00142 645 Pfam Weak chloroplast movement under blue light 22 572 IPR008545 -
Phco3g00142 645 Coils Coil 249 269 - -
Phco3g00142 645 MobiDBLite consensus disorder prediction 1 29 - -
Phco3g00142 645 Coils Coil 275 295 - -
Phco3g00142 645 Coils Coil 511 576 - -
Phco3g00142 645 Coils Coil 391 425 - -
Phco3g00142 645 Coils Coil 328 355 - -
Phco3g00142 645 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 21 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00142 Phco-Chr3 937598 940164 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00142 3 937598 940164 Phco3g00142 3 937598 940164 ECH
Phco11g01841 11 14776867 14780414 Phco3g00142 3 937598 940164 PCT