Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00137 ATGCTTACGTCAATCACGAATGAACACCGCTATTGGAGCCAGACACATCAAGAGAAGAGAGAGAAGAGGAGTCCAAGTTCTATCCACAGTTTGAGAAGCAGATCCTGTGCAATGGATGAGGTTGGGGACAATAAACACCACTCCAAACTCGTCATACCTGAAGAAAGCGAAGAGGTGGATGACTCTCCGATTGAGCAGGTGAGGTTGACGGTTCCAATAACCGACGACCCTACGCAGCCTGTACTGACATTCAGGACATGGACTCTGGGACTAGCTTCATGCATTGTTCTTGCATTCATCAACCAATTCTTCGGCTACAGAACCACCCCTCTTTCCATTTCTTCTGTGTCAGCACAGATTATTTCTCTCCCACTCGGCAAACTCATGGCCAGAACACTTCCAACCAAAGCTTATACTTTCCCTTTCACCAAGTGGTCTTTCTCCATGAACCCTGGTCCATTCAACTTAAAGGAGCATGCACTTATCACCATCTTTGCCAGTGCTGGATCTAGTGGTGTTTATGCCATCAACATTATCACGATTGTTAAGGCTTTCTACCACAGGAGCATCCACCCCATTGCTGCTTTCCTGCTGGCGTTATCCACTCAGATGCTTGGTTATGGATGGGCTGGCATTTTCAGAAAATTCCTGGTGGATTCCCCGTACATGTGGTGGCCTTCAAACCTTGTCCAGGTGTCTTTATTCAGGGCATTCCATGAAAAGGAGAAAAGGCCTAAAGGAGGAAACACAAGGCTGCAATTCTTTTTGCTGGTGTTTGTATCAAGCTTTGCTTATTACATTATTCCAGGTTATTTATTCCCAGGAATAGCAACAATATCATGGGTTTGCTTAGTTTGGAAAAAGTCCATCATTGCTCAACAAATTGGTTCGGGTATTACTGGGCTTGGCATTGGTTCATTTGGCCTGGACTGGAACACAGTGGCTGGCTTTTTGGGGACCCCTTTGGCTGTACCTGGCTTTGCCATCATCAACATACTGGTTGGATTTGTGCTCTTTATGTATGTTCTGATTCCCATTTCATATTGGAACAACGTATATGATGCCAAGAAGTTCCCCATCATCAGTTCTAAAACGTTTGATTCCACTGGCGCAAAATATAATGTCACTCGGATTCTGAATGCTGCAAATTTTGACATCAATATGGATAATTATAACAATTACAGCAAGCTCTATCTTAGTATCACATTTGCATTCGATTACGGATTGAGCTTTGCAAGTCTCACCGCCACTATTTCTCATGTTGCTCTCTTCCATGGAAAAACGATTGTTCAGATGTGGAAGAAGACAACATCTGCACTAAGAGAAAAAGGATTCGGAGATGTGCACACAAGACTTATGAAGAAAAACTATGAACAAGTCCCCGAGTGGTGGTTTGTGAGCATTTTGGTTCTAATGGTAGTTGTGGCCCTAATAACTTGTGAAGGCTTTGGCAAGCAACTTCAGTTGCCGTGGTGGGGAGTCCTACTGTCCCTTGTTATTGCGTTAGTTTTCACTTTGCCAATTGGGGTAATTCAAGCAACAACAAACATGCAAGCCGGGCTCAACGTGATTACAGAGTTAATAATTGGGTACCTTTACCCCGGGAAGCCGCTTGCTAATGTAGCCTTCAAGACTTACGGCTACATCAGCATGTCACAGGCACTCGGATTCCTTGGAGACTTCAAATTAGGCCACTACATGAAAATTCCTCCAAAATCCATGTTCATCGTGCAGTTGGTTGGTACCATAGTTGCTTCAGGTGTGTACTTTGGCACAGCATGGTGGCTTCTGACGACCGTTCCAGACATCTGTGATCAAGCAAAGTTGCCAGATAATAGTCCATGGCAATGCCCTGGTGACGATGTGTTTTACAATGCTTCAATCATATGGGGAGTGGTGGGTCCAAAGAGAATGTTTACCAAGGATGGCATTTACCCGGGGATGAATTGGTTTTTCCTCATTGGTGCAATTCTTCCTGTTCCAGTGTGGATACTTGCTCGCAAATACCCCAACCAAAAGTGGATTAAACTCATCAACATGCCCCTCATCATTGCTGGTGCTGGGGGTATTCCACCAGCCAGAACTGTGAACTACACAACCTGGGGAATAGTTGGAATCTTCTTCAATTTCTTCGTTTACTATAAGTTCAAAGCTTGGTGGGCTCGTCACACTTACATTCTCTCAGCTGCATTAGATGCTGGACTTGCTTTCATGGGTGTGGTTCTCTACTTTGCCCTCCAAAGTTATGACAATTTAGGTCCAACCTGGTGGGGTGGGGAAGCTGACCACTGCCCTTTGGCCAAATGCCCTACAGCTCCAGGCGTGATTGCTCCTGGATGCCCTACACTCTGA 2352 0.4507 MLTSITNEHRYWSQTHQEKREKRSPSSIHSLRSRSCAMDEVGDNKHHSKLVIPEESEEVDDSPIEQVRLTVPITDDPTQPVLTFRTWTLGLASCIVLAFINQFFGYRTTPLSISSVSAQIISLPLGKLMARTLPTKAYTFPFTKWSFSMNPGPFNLKEHALITIFASAGSSGVYAINIITIVKAFYHRSIHPIAAFLLALSTQMLGYGWAGIFRKFLVDSPYMWWPSNLVQVSLFRAFHEKEKRPKGGNTRLQFFLLVFVSSFAYYIIPGYLFPGIATISWVCLVWKKSIIAQQIGSGITGLGIGSFGLDWNTVAGFLGTPLAVPGFAIINILVGFVLFMYVLIPISYWNNVYDAKKFPIISSKTFDSTGAKYNVTRILNAANFDINMDNYNNYSKLYLSITFAFDYGLSFASLTATISHVALFHGKTIVQMWKKTTSALREKGFGDVHTRLMKKNYEQVPEWWFVSILVLMVVVALITCEGFGKQLQLPWWGVLLSLVIALVFTLPIGVIQATTNMQAGLNVITELIIGYLYPGKPLANVAFKTYGYISMSQALGFLGDFKLGHYMKIPPKSMFIVQLVGTIVASGVYFGTAWWLLTTVPDICDQAKLPDNSPWQCPGDDVFYNASIIWGVVGPKRMFTKDGIYPGMNWFFLIGAILPVPVWILARKYPNQKWIKLINMPLIIAGAGGIPPARTVNYTTWGIVGIFFNFFVYYKFKAWWARHTYILSAALDAGLAFMGVVLYFALQSYDNLGPTWWGGEADHCPLAKCPTAPGVIAPGCPTL 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00137 783 MobiDBLite consensus disorder prediction 1 31 - -
Phco3g00137 783 NCBIfam small oligopeptide transporter, OPT family 60 748 IPR004648 GO:0055085
Phco3g00137 783 NCBIfam OPT family oligopeptide transporter 66 747 IPR004813 GO:0035673
Phco3g00137 783 PANTHER ISP4 LIKE PROTEIN 54 781 IPR004648 GO:0055085
Phco3g00137 783 MobiDBLite consensus disorder prediction 12 28 - -
Phco3g00137 783 Pfam OPT oligopeptide transporter protein 82 745 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00137 Phco-Chr3 913602 917469 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00137 3 913602 917469 Phco3g00137 3 913602 917469 ECH