Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00135 ATGAGCGGCGGTGGTGGCTCTTCCACTTTTAGGGTTCCGATCCCAAACAATGTACGCAAAATCATCCAAGACATCCGTGAGATCACCGGCAAGCAGCACACCGACGATGAAATCTACGCGGTCCTCCGTGAATGCTCCATGGATCCCAACGAAACCGCTCAGAAGCTTCTCTATTTAGATACTTTTCATGAGGTGCGAAGGAGACGTGACCGAAAGAAGGAGGGATTGAGCAGCAGGGTTTCTGATGAGCCTAGGATAAAGCAAGGTGGACAAGGGAGGGGGGGAAGGGGTTCTTCAGGAGGATATTCCCCTAACTTTCCTGATGGTGGTGGTGGGAGGAACATAGCTAATCGAAGGGAAAATGGAGTCAATCACATTGCAGAGAGAAGTCATGCTCCCTCTACTCAGCCAGTCTTGCAGAAAACTAAGACTAATACAGCATCTCAAGTTACAAGAGTTTCAGCTGTTGCACCTCATGGTGCTGCAAATCAATCCAATGGGAAGTCTGTTCACGTGTCTGCTGGTCAATCTCCCATTGTTAATGTACCTAAGAGTAGTTCAGCTGCTAATGACACTGGCTATGGAGAAAATGTCCAACCTCAAGCTGCTGCTGTTGCCACACCCTCTTCCCTTACTCAAACCTTTGGCTTGGTTACTAGTACTGACCAAGGAAAATCCTTGTCAAGTTCTGATCAACTTCAAACTTCTGCCTCGGGTGTCCATTCCTCTTTGGATCCAGTTGTAGCATCTTCTGTCTCCCGGCATCCTGATGTCAGTGGTGCAATCAGTAGGGAAGTTGGGAGCAATCGGATATCTACTGGATCAAATCATGTTAAAGGAAATAAACCTGTTGTTCAAGAAGTTAATGATTTATCAGCATCCAAGAATGATAAATCTGGGTCCATGGGCTCATCAAGCAGAACAAATGCCCCACAGAAGCCAAATGAAGTTGAACACAATCGGTTATCTGAGCCCTCACAACTTTCATCTCCATCCCCAAATGATTCATTGAGGCCATCTTCTAGTTCTGGCAGCCAGCCAGCTCTAGCTAATATCACGGAGGTTTCAACTTCAGAAGTTTCTGTGCAATCTTCAGCAGAGTTAAGGCAACATGTTACATTTCCGAACCATTTCCAAGTACCAGAGGCTTTAAAAAGTGGTCTGACATTTGGAAGCTTTGATACTTTTGGCCCAAGTGAAAAATCTAACAGTGGAACTGATGGGGACAATAACGTTTCTTGCGCTCTTGAACCTTCACCAGTGAGTGATGAAGCCGCAACTTCAAGCAACCAAAATGCATCATTAACTTCACAAGGGGATCATCTTGATTATCCACATTCTTCAACTTATTTGATTGAAAAGACACCAGATACAGAAGGCAATTCTATAAATGGTACTGACACAAAGGTTGATCAGCAAAAGAAGGAGGTTTTGTTGGCCCCTGAGGCCCATCAACTTCCAACTGTTCCAACAGCTCAAAACTATGGTTTGAATTTCATGTCCACCATGTTAGGGACTCAGCAGGTTCAATTTGAGGGAACTGAGCCCCAGGCACAAGATACTTCTCGATTTCCTAACTATGTTAGTGCAGGTTCTCCGGGTGTGTCCCCTAGCCCAACTCCACCCCTACAGAGTTCTATACCTGTGTCTCCACAGTCAGTTTCTATTTTCAGGCCACCCTACCCTACTAACTTCTTCCCTTATGGCCACTATTACCCTCCAATTTATGTGTCTCCCATACACCAATTTTTAAGCCACAATGGTTTCCCTCAACAGCCATCAGCTGGCAACATGTATCTACCAGCAGCAGCTGGCATCAAATTTCCACTCCCTCAGTACAAGGCAGGAGCAAACACAGGAAATGCAGCTCATATCGGAATTCCTTCTGGTTCATTTATCACACCACCTGTAGGTTATGCACCAGGTCAAACAGTTAGTACCGGAAGCTCCACTGGAAATGAAGATCTTTCTGTGTCGCAGTTAAAGGAAAACCAGATCTACACAACAGGACAGCTGAGTGAAGGCTCTGCAGTGTGGATACCTGCTCCAGGCCAAGACATATCCAGTTTGCAAGTTAATTCTCTGTATAACCTTACCCCTCAGGGACAGCATCTCACCTTTCCCCCATCACAGGCTGCTCATGGAGCATTTGCTGGTATCTATCAAGCAGGGCAGACTGTAGCTTCACCTTCAACGCTATTGCAACAGTCTCAAGCTGTGGCTGGGCCTGTTGAAACTGTAGGGCCCCCTTCAGGATCTTATCAGCAACCTCAGCCTGCGCAGATCAATTGGAACGCTAATTTTTAG 2307 0.4608 MSGGGGSSTFRVPIPNNVRKIIQDIREITGKQHTDDEIYAVLRECSMDPNETAQKLLYLDTFHEVRRRRDRKKEGLSSRVSDEPRIKQGGQGRGGRGSSGGYSPNFPDGGGGRNIANRRENGVNHIAERSHAPSTQPVLQKTKTNTASQVTRVSAVAPHGAANQSNGKSVHVSAGQSPIVNVPKSSSAANDTGYGENVQPQAAAVATPSSLTQTFGLVTSTDQGKSLSSSDQLQTSASGVHSSLDPVVASSVSRHPDVSGAISREVGSNRISTGSNHVKGNKPVVQEVNDLSASKNDKSGSMGSSSRTNAPQKPNEVEHNRLSEPSQLSSPSPNDSLRPSSSSGSQPALANITEVSTSEVSVQSSAELRQHVTFPNHFQVPEALKSGLTFGSFDTFGPSEKSNSGTDGDNNVSCALEPSPVSDEAATSSNQNASLTSQGDHLDYPHSSTYLIEKTPDTEGNSINGTDTKVDQQKKEVLLAPEAHQLPTVPTAQNYGLNFMSTMLGTQQVQFEGTEPQAQDTSRFPNYVSAGSPGVSPSPTPPLQSSIPVSPQSVSIFRPPYPTNFFPYGHYYPPIYVSPIHQFLSHNGFPQQPSAGNMYLPAAAGIKFPLPQYKAGANTGNAAHIGIPSGSFITPPVGYAPGQTVSTGSSTGNEDLSVSQLKENQIYTTGQLSEGSAVWIPAPGQDISSLQVNSLYNLTPQGQHLTFPPSQAAHGAFAGIYQAGQTVASPSTLLQQSQAVAGPVETVGPPSGSYQQPQPAQINWNANF 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00135 768 MobiDBLite consensus disorder prediction 517 534 - -
Phco3g00135 768 MobiDBLite consensus disorder prediction 221 249 - -
Phco3g00135 768 MobiDBLite consensus disorder prediction 517 547 - -
Phco3g00135 768 MobiDBLite consensus disorder prediction 399 444 - -
Phco3g00135 768 SUPERFAMILY UBA-like 14 75 IPR009060 GO:0005515
Phco3g00135 768 Pfam GBF-interacting protein 1 N-terminal 14 74 IPR009719 -
Phco3g00135 768 PANTHER FLOCCULATION PROTEIN (DUF1296) 1 767 IPR044277 -
Phco3g00135 768 MobiDBLite consensus disorder prediction 221 356 - -
Phco3g00135 768 MobiDBLite consensus disorder prediction 399 446 - -
Phco3g00135 768 MobiDBLite consensus disorder prediction 128 147 - -
Phco3g00135 768 MobiDBLite consensus disorder prediction 67 147 - -
Phco3g00135 768 MobiDBLite consensus disorder prediction 265 356 - -
Phco3g00135 768 MobiDBLite consensus disorder prediction 67 81 - -
Phco3g00135 768 MobiDBLite consensus disorder prediction 178 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00135 Phco-Chr3 895500 902452 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00135 3 895500 902452 Phco3g00135 3 895500 902452 ECH