Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00116 ATGACTGTGGGGGCAGGAATATCTGTTGCAGATGGAAACTTGATGGTGTTGGGGAAGAGAGTGCTGAGCCATGTCCATGACAACGTTGTTGTTACCCCTGCATGTGGGGGAGCGTTGCTCAACGGAGCATTCATTGGGGTTGAATCCCATCAGAAGGGTAGTCGCACAGTCTTCCCAATCGGCAAGCTTGAGGGGTTGCGGTTTATGTGTGCTTTCCGGTTCAAGATGTGGTGGATGACGCAGAGAATGGGCACTTGCGGACAAGAAGTTCCCATTGAGACGCAGTTCTTGCTTGTTGAAGCACAAAGTGGCACTGATATTGATGCAGGAGAAGAAGACCCAGCTGCTTCTACCTATGCAGTTTTCTTACCCCTTCTGGAAGGAGATTTCAGAGCAGTTCTTCAGGGGAATGATCGAAACGAGATTGAGATCTGTGTTGAAAGTGGTTGTCCTGCTGTGGAGGACTTTGATGGGACTCATTTAGTTTATATCGGGGCTGGATCCGACCCTTATGAAGTCATAACAACTGCTGTCAAAACTGTGGAGAAACACTTAGGGACCTTTGTTCATCGCGAGCGAAAGAAGATGCCAGATATGTTGAACTGGTTTGGATGGTGTACATGGGATGCTTTCTACACCAATGTCACTTCAGAGAATGTGAAGCAAGGATTACAGAGCTTCGAGAAAGGTGGAATTCCTGCGAAGTTTGTTATAATTGATGATGGCTGGCAATCTGTTGACATGGATCCCAATGGTACTGAATGGAAATCTGATCATGCAGCCAACTTTGCAAATCGCTTAACCAACATCAGAGAGAATCATAAATTCCAGAAGGATGGCAAAGAAGGTCAGAGAGTAGAGGACCCAGCTCTGGGACTTCGTCATATGACCAATGAAATCAAACAAGAGCATGATATAAAGTATGTATATGTGTGGCACGCAATAACAGGATATTGGGGTGGTGTTAAACCTGGGGTTACCGGCATGGAGCACTACGAGTCAAAGATGGCCTTCCCTGTCTCATCTCCTGGAGTTGAGTCAAATCAACCAGATGAAGCTTTGACAACCATTGCCATCAATGGACTTGGCCTTGTGAATCCCGAGAAAGTTTTTCACTTTTATGATGAACTTCACTCATATTTGGCTTCTGCTGGTATTGATGGCGTGAAGGTTGATGTTCAGAATATCCTTGAAACTCTTGGAGCAGGACATGGTGGGAGGGTGAAACTTGCAAGGAAATACCACCAGGCATTAGAGGCATCAATTTCCAGGAACTTCCCTGATAATGGAATCATTTGTTGCATGAGTCACAACACTGATGGACTATACAGCGCGAAGCGTTCAGCTGTTATTAGGGCATCAGATGATTTCTGGCCAAGAGACCCTGCTTCCCACACGATTCACATTGCATCAGTGGCTTACAATACTATTTTCCTTGGCGAATTTATGCAGCCAGACTGGGATATGTTTCATAGCCTGCATCCAATGGCTGAATACCATGCAGCAGCACGAGCTGTAGGGGGATGTCCAATTTATGTCAGTGACAAGCCTGGACACCATGACTTTGATCTTTTGAAGAAACTTGTACTACCTGATGGTTCTATATTAAGGGCTAAACTTCCAGGAAGACCAACAAAGGATTGCTTGTTTACTGATCCAGCCAGAGATGGAAAGAGTCTTCTAAAGATTTGGAACAAGAATGATTTTTCTGGAGTTGTTGCGGTATTCAATTGCCAAGGAGCTGGGTGGTGCAAAGTTGACAAGAAGAACCTTATCCACGATGAGAATCCAGACACTGTCACAGGTTTCATTAGAGCTAAAGATGTTGACTGTTTATCCAGAATAGCAGATGAGACGTGGACAGGAGATGCCATAATATATTCCCATCTTGGTGGAGAAATGGTTTATCTTCCAAAGAATGCAACCCTCCCAGTAACCTTAAAGTCCCGAGAATATGAAGTGTTTACAATAGTTCCCGTGAAAGAATTGAGCAATGACATCAAATTTGCTCCTATTGGTTTAATAAAGATGTTCAATTCAGGAGGGGCTGTCAAAGAATTCTTCAGTTGGGGATCTAATCAAAGTACAAATATAACAATGAAAGTTCGTGGTTGTGGTGAATTTGGTACTTATTCATCAGTTAGGCCTAAATTAATAACAGTTGATTCAGAGGAGGTAGAATTCAGGTATGAGGAAGATTCTGGATTGGTGACTGTTGATTTGAGAGTACCTGAGAAAGAGTTATACCAATGGAGTATTTCCATTGATTTTTGA 2274 0.4362 MTVGAGISVADGNLMVLGKRVLSHVHDNVVVTPACGGALLNGAFIGVESHQKGSRTVFPIGKLEGLRFMCAFRFKMWWMTQRMGTCGQEVPIETQFLLVEAQSGTDIDAGEEDPAASTYAVFLPLLEGDFRAVLQGNDRNEIEICVESGCPAVEDFDGTHLVYIGAGSDPYEVITTAVKTVEKHLGTFVHRERKKMPDMLNWFGWCTWDAFYTNVTSENVKQGLQSFEKGGIPAKFVIIDDGWQSVDMDPNGTEWKSDHAANFANRLTNIRENHKFQKDGKEGQRVEDPALGLRHMTNEIKQEHDIKYVYVWHAITGYWGGVKPGVTGMEHYESKMAFPVSSPGVESNQPDEALTTIAINGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLARKYHQALEASISRNFPDNGIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHAAARAVGGCPIYVSDKPGHHDFDLLKKLVLPDGSILRAKLPGRPTKDCLFTDPARDGKSLLKIWNKNDFSGVVAVFNCQGAGWCKVDKKNLIHDENPDTVTGFIRAKDVDCLSRIADETWTGDAIIYSHLGGEMVYLPKNATLPVTLKSREYEVFTIVPVKELSNDIKFAPIGLIKMFNSGGAVKEFFSWGSNQSTNITMKVRGCGEFGTYSSVRPKLITVDSEEVEFRYEEDSGLVTVDLRVPEKELYQWSISIDF 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00116 757 Gene3D Aldolase class I 199 528 IPR013785 -
Phco3g00116 757 FunFam Probable galactinol--sucrose galactosyltransferase 1 200 527 - -
Phco3g00116 757 Pfam Raffinose synthase or seed imbibition protein Sip1 7 740 IPR008811 -
Phco3g00116 757 PANTHER - 1 754 IPR008811 -
Phco3g00116 757 SUPERFAMILY (Trans)glycosidases 197 528 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00116 Phco-Chr3 752455 756218 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00116 3 752455 756218 Phco3g00116 3 752455 756218 ECH