Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00047 ATGCTTCAACTGGTTTATTGGAATATTGAGCCAAACTTGTCCCAACTGGCAAAAGATTTTGCCGCCAATAATACTTTCAACATAAGTGCATATGCTTTACTTTTACTTATAAACCACACTCACACTCTCTTCTCTTCTTCACTCTTCACACTCTTTCTCTCTTTTCTTTCTTTCTCTCTTTCCCTCTTTCCCTCTTCCTCCAAACACAACCAAATGAAGAACCTTCTCTTCCTCTTCCCCTTTCTCTTTCTCCTCCTCTCCTCCGCCGTCAGCGCCGCCCACAACATCACGCGCATCCTCGAAAAACACCCAGGCTTCTCCACCTTCAACCACTACCTCACCGTCACCCACCTCGCCGACGAGATAAACCGCCGCCAGACTATCACCGTCCTCGCCATCGACAATGGCGCCATGAACTCCCTCCTCGACAAGCACCTCTCCCTCCCCACCCTCAAAAACGTCCTCTCCCTCCACGTCCTCGTCGACTACTTCGGCGCCAAGAAGCTCCACCAGATCAACAACAGCACCACCCTCGTCTCCTCCATGTTCCAGGCCACCGGAGCAGCCGCTGGAACCTCCGGCTACGTCAACATCACCAACCTCAAGGGCGGCAAGGTGGGCTTCGCCGCCGAAGACAACGACGGCTCCCTCCACTCCTTCTACGTCAAATCCGTCCAAGAATTCCCCTACTACATCTCCGTCCTCCAAATCAGCAACCCCATAAGCTCCGCCGACGCCGAAGCCCCCACCGCCGCACCCTCCGCCATCGACCTTATCTCAATTATGTCCAAACAAGGCTGCAAGGCCTTCGCCGACCTCTTGAGAGGCTCCAAAGCGCTTCCAACTTTCAAAGAAAGCATTGACGGCGGCCTGACGGTTTTCTGCCCCACCGACAGCGCCGTCAACGGCTTCGCCCCCAAGTACAAGAACCTCACCGACTCTCAAAAAGTTTCCCTCTTGTTATACCACGGCGTTCCCGTTTACCAGTCCCTGCAGATGCTGAAGTCCAGCAACGGCATAATGAACACTCTCGCCACAGAGGGAGCCAACAAGTACGATTTCACCGTCCAGAATGACGGCGAAGACGTGAGTCTGAAGACGAAGGTTAACACTGTGAGTATAATTGGCACGCTGATAGATCAAGACCCTTTCGTGGCCTACAAGATCAACAAGGTCTTGATGCCCAGAGAGTTGTTCAAGGCCTCCGACGTGGACGAAGCACCCGCCGAGTCACCAAAGCCTCCGAAGAAGAAGAGCAAGAAGGGAGGGCAAAATTCAGACGCCGCCGATGCTCCCGCGGACGGACCGGCGTCGGAATCCGACGATCAGAAAGCTGCTGATGAAGACAGCAATGGGGTAAGTGGATTGCACGACGTGAGATTGGTGTCGGTGTTGTTCAGTGTGTTGATTGGATTTTTGAGTCTATGA 1428 0.5343 MLQLVYWNIEPNLSQLAKDFAANNTFNISAYALLLLINHTHTLFSSSLFTLFLSFLSFSLSLFPSSSKHNQMKNLLFLFPFLFLLLSSAVSAAHNITRILEKHPGFSTFNHYLTVTHLADEINRRQTITVLAIDNGAMNSLLDKHLSLPTLKNVLSLHVLVDYFGAKKLHQINNSTTLVSSMFQATGAAAGTSGYVNITNLKGGKVGFAAEDNDGSLHSFYVKSVQEFPYYISVLQISNPISSADAEAPTAAPSAIDLISIMSKQGCKAFADLLRGSKALPTFKESIDGGLTVFCPTDSAVNGFAPKYKNLTDSQKVSLLLYHGVPVYQSLQMLKSSNGIMNTLATEGANKYDFTVQNDGEDVSLKTKVNTVSIIGTLIDQDPFVAYKINKVLMPRELFKASDVDEAPAESPKPPKKKSKKGGQNSDAADAPADGPASESDDQKAADEDSNGVSGLHDVRLVSVLFSVLIGFLSL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00047 475 MobiDBLite consensus disorder prediction 403 424 - -
Phco3g00047 475 FunFam Fasciclin-like arabinogalactan protein 2 92 234 - -
Phco3g00047 475 ProSiteProfiles FAS1/BIgH3 domain profile. 254 393 IPR000782 -
Phco3g00047 475 SUPERFAMILY FAS1 domain 252 396 IPR036378 -
Phco3g00047 475 SMART fasc_3 292 396 IPR000782 -
Phco3g00047 475 ProSiteProfiles FAS1/BIgH3 domain profile. 93 260 IPR000782 -
Phco3g00047 475 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 67 456 IPR033254 -
Phco3g00047 475 Pfam Fasciclin domain 105 178 IPR000782 -
Phco3g00047 475 Pfam Fasciclin domain 267 395 IPR000782 -
Phco3g00047 475 SUPERFAMILY FAS1 domain 99 219 IPR036378 -
Phco3g00047 475 Gene3D FAS1 domain 258 395 IPR036378 -
Phco3g00047 475 Gene3D FAS1 domain 92 224 IPR036378 -
Phco3g00047 475 MobiDBLite consensus disorder prediction 403 453 - -
Phco3g00047 475 FunFam Fasciclin-like arabinogalactan protein 10 247 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00047 Phco-Chr3 359118 362096 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00047 3 359118 362096 Phco3g00047 3 359118 362096 ECH