LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phco2g03055	ATGGGTTGTTGGGTTATATTGTGTTTGTCAGTGTTGTACTTCTCACTAAGTTCAGATGCTGACTATGGTGACTATCAAGTTCCCATCCCAACCACTCTGGATGGACCCTTCAAGCCTGTCACCGTTCCTCTTGACCAAACCTTCCGAGGAAACGCCATGGACTTGCCACACACGGATCCGCTGCTTCAAACCACCGCTCAAGGCTTCCAACCACAACAGATCTCTCTCTCCCTCTCCGCTTCTCATCACTCTGTTTCCATTTCTTGGATTACAGGGGAATTCCAAATTGGGGACAACATAGAGCCCTTGGATCCTGACAGTGTTGCGAGCGTAGTTCGATATGGAAGGTTCCGAAGGTCCATGAGTCACCAAGCTACGGGTTATTCCCTCGTTTACAGTCAACTTTATCCTTTTGAAGGCCTTCAGAACTACACCTCTGGAATTATACATCACGTTCGTCTCACAGGATTGAGACCCAACACACTCTATCAATATGAATGCGGAGATCCTTCTTTGTCAGCAATGAGTGATGTTCATTACTTCAGGACTATGCCAGTTTCTGGCCCCAAGAGCTACCCTAACAGAATAGCAGTGGTTGGAGACTTGGGTCTTTCATACAATACCACATCCACTGTAGACCACATCACCAGTAACCATCCCGATCTTATTCTGTTGGTTGGAGATGTTAGTTATGCCAATCTTTATCTTACTAATGGTACTGGGGCAGACTGCTATTCTTGCGCATTTCCTAACACTCCCATCCGTGAAACGTATCAACCTCGTTGGGATTACTGGGGAAGGTACATGCAGCCTCTGATTTCTAGTGTCCCGATAATGATAATAGAAGGGAATCATGATATAGAACCACAAGCTGAAAACCAGACATTTGTTGCTTATAGTTCTCGATTTGCTTTCCCATCAGAAGAGAGTGGATCATCATCCACTTTATACTATTCTTTCAATGCTGGAGGGATACATTTTATAATGCTCGGGTCCAGCACATCGTATGACAAATCAGGGGACCAGTACAAGTGGTTGGAGAGAGACTTGGCTTCTCTTGACAGGGCAGTAACTCCGTGGTTGGTAGCTACATGGCATGCACCTTGGTACAGCACCTACAAGGCACATTATAGAGAAGCAGAGTGTATGAGGGTAGAGATGGAAGACTTGCTATATAAATATGGCGTTGACATTGTCTTCAATGGACATGTTCATGCGTATGAGAGATCAAACCGGGTATACAACTACACATTGGATCCTTGTGGTCCTGTTTATATCACGGTTGGTGATGGTGGTAACAGGGAACAGATGGCAATCACACATGCTGATGAACCTGGACAGTGTCCAGAACCATCAACTACACCAGATGACTTTATGGGTGGCTTCTGCGCCTTTAATTTTACATCCGGCCCTGCAGCGGGTAACTTCTGTTGGGATCGACAGCCAGATTATAGTGCTTTAAGAGAAAGTAGCTTTGGTCATGGCATTCTGGAGGTGAAAAATGAAACCCATGCACTGTGGATTTGGCATCGCAATCGAGACTTTTATGGTAGTGCTGGAGATGAGATTTACATTGTTAGGCAACCTCAAAACTGCCGTCAGCTACATGACTTAATGTATTGA	1623	0.4522	MGCWVILCLSVLYFSLSSDADYGDYQVPIPTTLDGPFKPVTVPLDQTFRGNAMDLPHTDPLLQTTAQGFQPQQISLSLSASHHSVSISWITGEFQIGDNIEPLDPDSVASVVRYGRFRRSMSHQATGYSLVYSQLYPFEGLQNYTSGIIHHVRLTGLRPNTLYQYECGDPSLSAMSDVHYFRTMPVSGPKSYPNRIAVVGDLGLSYNTTSTVDHITSNHPDLILLVGDVSYANLYLTNGTGADCYSCAFPNTPIRETYQPRWDYWGRYMQPLISSVPIMIIEGNHDIEPQAENQTFVAYSSRFAFPSEESGSSSTLYYSFNAGGIHFIMLGSSTSYDKSGDQYKWLERDLASLDRAVTPWLVATWHAPWYSTYKAHYREAECMRVEMEDLLYKYGVDIVFNGHVHAYERSNRVYNYTLDPCGPVYITVGDGGNREQMAITHADEPGQCPEPSTTPDDFMGGFCAFNFTSGPAAGNFCWDRQPDYSALRESSFGHGILEVKNETHALWIWHRNRDFYGSAGDEIYIVRQPQNCRQLHDLMY	540

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phco2g03055	540	SUPERFAMILY	Metallo-dependent phosphatases	195	516	IPR029052	-
	Phco2g03055	540	CDD	MPP_PAPs	190	527	IPR041792	-
	Phco2g03055	540	FunFam	Purple acid phosphatase	190	452	-	-
	Phco2g03055	540	Pfam	Purple acid Phosphatase, N-terminal domain	71	183	IPR015914	GO:0003993\|GO:0046872
	Phco2g03055	540	SUPERFAMILY	Purple acid phosphatase, N-terminal domain	49	185	IPR008963	GO:0003993\|GO:0046872
	Phco2g03055	540	Gene3D	-	190	460	IPR029052	-
	Phco2g03055	540	Gene3D	-	462	536	IPR029052	-
	Phco2g03055	540	Pfam	Iron/zinc purple acid phosphatase-like protein C	422	514	IPR025733	-
	Phco2g03055	540	Gene3D	-	70	186	-	-
	Phco2g03055	540	PANTHER	ACID PHOSPHATASE RELATED	9	530	IPR039331	GO:0003993
	Phco2g03055	540	Pfam	Calcineurin-like phosphoesterase	195	407	IPR004843	GO:0016787

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phco2g03055	Phco-Chr2	59017340	59019932	Transposed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Phco2g03055	2	59017340	59019932	Phco2g03055	2	59017340	59019932	ECH