Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco2g03053 | ATGAAGAAGAAGAAACAGGTACCGGAGTGGATGAACAGTTCTCTGTGGTCCTCCCCCTCCGACCGCGACCGCTTTAGCCCGCCCTCTCCACCTCCTTCTCCTCCTCCTCCTCCTCCGCCTCCCCCCGTCTCTGTCAGAGAAGATCCCCCAACTAATCACAATGCCTCTCCTTCTTCTTCGTCCGTCGTCTCTTCTGCTTCTGCATCCTCCGCCGCCGATGACATCTCCTCTCAAGCTCAGTTGTTGACCGAGTTATCTAGGAAGGTTATAGACATGCGCGAGTTGAGGAGAGTCGCTTCTCAAGGTATTCCTCATGCTGCCGCCCCTGCTTTACGCCCTACGCTCTGGAAGCTTTTGCTTGGATATCTTCCGTCCGATCGTGCCCTTTGGTCCTCTGAATTAGCCAATAAGAGGTCCCAGTACAGACATTTCAAAGACGACCTCCTCATGAATCCTTCAGAAATCACGAGGAGGATCTACAACTCCGCTGCTCATGACATCGATGATGCAAAATCTGAGACTCGTATATTGCTTTCTAGATCACAAATCACTCATGAAGATCACCCTTTGAGTCTTGGCAAGACCAGCGTATGGAATCAGTTCTTCCAGGACACAGAGCTCATAGAGCAGATTGATCGTGATGTAAAACGGACTCATCCAGATATAAACTTCTTCTCTGGTGATTCTCAATTGGCAAAATCTAATCAGGATGCTTTGAAGAACATATTACTTATTTTTGCAAAGTTGAATCCAGGTATAAGATATGTTCAAGGGATGAATGAAGTATTGGCTCCTCTCTTCTATGTTTTCAAAAATGACCCTGATGAGGAAAATGCTGCCTTTGCTGAAGCAGACACATTCTTTTGTTTTGTTGAGCTATTGAGTGGGTTCCAAGATAACTTTTGTCAACAACTTGATAATAGTATTGTTGGAATCCGTTCCACTATTACAAGATTGTCCCAGCTTTTAAAAGAACACGATGAAGAACTGTGGCGTCATCTTGAGGTCACTACTCAGGTCAATCCCCAATTCTATGCATTTAGGTGGATTACTCTCCTCTTGACTCAGGAATTTAATTTTTCTGACATCCTCCATATTTGGGACATCATTTTAAGTGATCCAGAGGGTCCACAGGAAACACTTCTCAGAATATGCTGCGCCATGCTAATTTTCGTCCGTAGGCGCCTCCTAGCGGGTGATTTCACTTCTAACCTCAAGTTGCTTCAAAGTTATCCCTCTACAAACATTAGTCATTTGCTCCATGTAGCAAACAAGTTACGTGTACAGTCAGGCTAA | 1296 | 0.4514 | MKKKKQVPEWMNSSLWSSPSDRDRFSPPSPPPSPPPPPPPPPVSVREDPPTNHNASPSSSSVVSSASASSAADDISSQAQLLTELSRKVIDMRELRRVASQGIPHAAAPALRPTLWKLLLGYLPSDRALWSSELANKRSQYRHFKDDLLMNPSEITRRIYNSAAHDIDDAKSETRILLSRSQITHEDHPLSLGKTSVWNQFFQDTELIEQIDRDVKRTHPDINFFSGDSQLAKSNQDALKNILLIFAKLNPGIRYVQGMNEVLAPLFYVFKNDPDEENAAFAEADTFFCFVELLSGFQDNFCQQLDNSIVGIRSTITRLSQLLKEHDEELWRHLEVTTQVNPQFYAFRWITLLLTQEFNFSDILHIWDIILSDPEGPQETLLRICCAMLIFVRRRLLAGDFTSNLKLLQSYPSTNISHLLHVANKLRVQSG | 431 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco2g03053 | 431 | Gene3D | putative rabgap domain of human tbc1 domain family member 14 like domains | 192 | 302 | - | - | |
| Phco2g03053 | 431 | MobiDBLite | consensus disorder prediction | 24 | 47 | - | - | |
| Phco2g03053 | 431 | FunFam | TBC1 domain family member 13 | 191 | 302 | - | - | |
| Phco2g03053 | 431 | SUPERFAMILY | Ypt/Rab-GAP domain of gyp1p | 311 | 428 | IPR035969 | - | |
| Phco2g03053 | 431 | MobiDBLite | consensus disorder prediction | 49 | 65 | - | - | |
| Phco2g03053 | 431 | FunFam | TBC1 domain family member 13 | 309 | 430 | - | - | |
| Phco2g03053 | 431 | Pfam | Rab-GTPase-TBC domain | 110 | 396 | IPR000195 | - | |
| Phco2g03053 | 431 | SUPERFAMILY | Ypt/Rab-GAP domain of gyp1p | 84 | 333 | IPR035969 | - | |
| Phco2g03053 | 431 | Gene3D | - | 310 | 430 | - | - | |
| Phco2g03053 | 431 | SMART | tbc_4 | 99 | 400 | IPR000195 | - | |
| Phco2g03053 | 431 | MobiDBLite | consensus disorder prediction | 1 | 65 | - | - | |
| Phco2g03053 | 431 | PANTHER | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN | 64 | 409 | - | - | |
| Phco2g03053 | 431 | ProSiteProfiles | TBC/rab GAP domain profile. | 106 | 374 | IPR000195 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco2g03053 | Phco-Chr2 | 59006600 | 59011880 | Dispersed |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phco2g03053 | 2 | 59006600 | 59011880 | Phco2g03053 | 2 | 59006600 | 59011880 | ECH |