Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g03048 ATGCAGAGGATTGAATCTTTGGGAGTCTCGTATTTCACCTTAAACCCTAGCCAGCCGCTTTGCTCTTCCTTCTTCAATTCGTTCTGGGTTGATGCTTGTACCAACTATCATGCTAGTGGGTCAGTGATAAGAATAGATGCTCTGCCATCACTAAGAACTCGGTTGCTCCAAATTCAGTCAACAATCATAATGGCGTTTTATAATAAGGTTGGAAATGTCTTGAGGCAGGGTGCCGCTCGCAGCACACAAGCACCTGTTACATCCATGCTTAATTATATTCGCTGCATGTCTTCAAGCAAGCTTTTCATTGGAGGCCTTTCGTACGGAGTTGATGACCAGTCTCTTAGGGACGCATTTGCTAGCTATGGAGACGTGGTTGAGGCAAGGGTTATAACTGACAGAGACACTGGAAGATCAAGGGGATTTGGATTTGTCAACTTCTCCAGTGACGAGTCTGCAACTTCGGCACTCTCTGCAATGGACGGGCAGGATCTAAATGGGCGAAACATCAGGGTGTCATATGCAAATGATAGACCTTCTGGGCCACGATCTGGTGGCGGTGGTGGTTATGCTTCTCGTAATGGTGGTTGGTGA 594 0.468 MQRIESLGVSYFTLNPSQPLCSSFFNSFWVDACTNYHASGSVIRIDALPSLRTRLLQIQSTIIMAFYNKVGNVLRQGAARSTQAPVTSMLNYIRCMSSSKLFIGGLSYGVDDQSLRDAFASYGDVVEARVITDRDTGRSRGFGFVNFSSDESATSALSAMDGQDLNGRNIRVSYANDRPSGPRSGGGGGYASRNGGW 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g03048 197 MobiDBLite consensus disorder prediction 172 197 - -
Phco2g03048 197 FunFam Glycine-rich RNA-binding protein 2 88 197 - -
Phco2g03048 197 CDD RRM2_NsCP33_like 100 175 - -
Phco2g03048 197 SUPERFAMILY RNA-binding domain, RBD 96 195 IPR035979 GO:0003676
Phco2g03048 197 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 99 177 IPR000504 GO:0003723
Phco2g03048 197 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 101 171 IPR000504 GO:0003723
Phco2g03048 197 SMART rrm1_1 100 173 IPR000504 GO:0003723
Phco2g03048 197 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 97 192 - -
Phco2g03048 197 Gene3D - 93 197 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g03048 Phco-Chr2 58977779 58979567 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g03048 2 58977779 58979567 Phco2g03048 2 58977779 58979567 ECH