Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g03046 ATGTTTAGAGATAACACAAAAGAGAAGAGAATGGACACAAGCAAGAGCATGAAGCTGGAGAGATACAACAGCTACATACGGAGAGTCAACAGCACCAAACTGCTAAACGCCTCCTCCAAGCTCCTCTTCCGCGCCACCCTTCTCGTCGCACTCATCCTCGTTTTCCTCTTCACCTTCAACTACCCTCCCCTCGCCGACTCCACCCACCGCCATCTCCACGCCCACTCCCACTTCCTCTCCTCCGCATTCGGCGCCTGGGAGAAGCAGCTCCGCCACTCCTCCACTCCCCGCCGCCCCAACGGCCTCACCGTCCTCGTAACGGGGGCGGCTGGCTTCGTTGGCAGCCACTGCTCTCTTGCCCTCAAAAGGCGGGGGGACGGGGTGCTGGGTCTGGACAACTTCAACTCCTACTACGACCCCTCCCTCAAGCGCGCCCGCCAAGCAATGCTGGCCAAGCACCAGGTCTTCATCGTGGAAGGGGATCTCAACGACACGCCCTTGCTCCAGAAGCTCTTCGACGTCGTCGCCTTCACCCACATCCTCCACCTCGCCGCCCAGGCCGGCGTCCGCTATGCCATGCAGAATCCCCAGTCCTACATCACCGCCAACATTGCAGGCTTCGTCAACCTTCTCGAAGTCGCCAAATCAGCCAACCCCCAGCCCTCCATAGTGTGGGCTTCCTCCAGCTCCGTCTACGGCCTCAACACTCAGAACCCCTTCTCGGAGCTCCACCGGACCGACCAACCCGCCAGCCTCTACGCCGCCACCAAGAAAGCGGGGGAGGAAATCGCCCACACCTACAACCACATTTACGGCCTCTCACTGACCGGCCTCCGGTTCTTCACGGTGTACGGCCCCTGGGGGAGACCCGACATGGCTTACTTTTTCTTCACCAAAGACATCCTCCAGGGGAAGACCATCGACGTGTACCAGACGCAGGATGGGAAGCAGGTGGCGCGTGACTTCACCTACATCGACGACATCGTGAAGGGGTGCCTGGGGGCACTGGACACCGCGGAGAAGAGCACCGGGAGCGGTGGGAAGAAGCGTGGGCCAGCCCAGTTGAGGATTTACAATCTGGGCAACACCTCCCCGGTGCCGGTGGGGAACCTGGTCTCCATTCTGGAAGGCCTGCTGAACACGAAGGCGAAAAGGCACGTGATCAAGATGCCTTCGAACGGCGACGTTCCCTACACACACGCGAATGTGAGTCAGGCCTTCCACGATTTCTCTTACAAACCCACCACCGACCTCCCCACCGGCCTCCGCAAGTTCGTGAAGTGGTACGTGGGCTATTATGGACCCCACCTCAGGCCCAAAAAGGAATCTCGTCTTGACAACTGA 1344 0.5975 MFRDNTKEKRMDTSKSMKLERYNSYIRRVNSTKLLNASSKLLFRATLLVALILVFLFTFNYPPLADSTHRHLHAHSHFLSSAFGAWEKQLRHSSTPRRPNGLTVLVTGAAGFVGSHCSLALKRRGDGVLGLDNFNSYYDPSLKRARQAMLAKHQVFIVEGDLNDTPLLQKLFDVVAFTHILHLAAQAGVRYAMQNPQSYITANIAGFVNLLEVAKSANPQPSIVWASSSSVYGLNTQNPFSELHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYQTQDGKQVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGPAQLRIYNLGNTSPVPVGNLVSILEGLLNTKAKRHVIKMPSNGDVPYTHANVSQAFHDFSYKPTTDLPTGLRKFVKWYVGYYGPHLRPKKESRLDN 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g03046 447 Pfam NAD dependent epimerase/dehydratase family 104 342 IPR001509 -
Phco2g03046 447 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 96 433 IPR036291 -
Phco2g03046 447 Gene3D - 105 416 - -
Phco2g03046 447 Gene3D - 281 429 - -
Phco2g03046 447 FunFam UDP-glucuronate 4-epimerase 3 103 434 - -
Phco2g03046 447 PRINTS Nucleotide sugar epimerase signature 130 146 - -
Phco2g03046 447 PRINTS Nucleotide sugar epimerase signature 320 335 - -
Phco2g03046 447 PRINTS Nucleotide sugar epimerase signature 355 370 - -
Phco2g03046 447 PRINTS Nucleotide sugar epimerase signature 395 412 - -
Phco2g03046 447 PANTHER EPIMERASE-RELATED 86 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g03046 Phco-Chr2 58973001 58974406 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g03046 2 58973001 58974406 Phco2g03046 2 58973001 58974406 ECH