Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g03044 ATGAGCACTGTTGATAAAATGCTGATCAAGGGCATCCGGAGTTTCGACCCGGAGAACAAGAACGTCATCACCTTCTTCAAGCCCTTAACCCTAATCGTTGGTCCCAACGGTGCTGGCAAGACCACCATAATCGAGTGCTTGAAGCTTTCCTGCACCGGCGAGTTGCCTCCTAACGCCAGGTCTGGCCACAGCTTCATCCACGACCCCAAGGTCGCCGGAGAAACTGAAACCAAGGGACAGATTAAGCTCCGATTCAAGACGGCCGCTGGTAAAGACGTGGTCTGCGTCAGGTCCTTTCAGCTTACGCAAAAGGCCTCTAAAATGGAATACAAGGCTATTGAGAGTGTCCTTCAAACCATTAATCCTCACACAGGAGAGAAAGTTTGCCTCAGCTATCGATGCGCTGACATGGACAGAGAGATTCCTGCCCTCATGGGTGTTTCCAAGGCCATTCTCGAAAATGTTATTTTCGTTCACCAAGATGAAGCCAACTGGCCCCTACAGGATCCTTCCACCTTAAAGAAGAAGTTTGACGACATATTTTCCGCAACTCGATACACCAAGGCATTGGAAGTTATAAAGAAACTTCACAAAGAACAGGCTCAAGAGATAAAGACTTACAAGCTCAAACTCGAACATCTTCAAACTCTCAAAGATGCTGCATATAAGCTACGGGAAAGCATTGCACAGGATGAAGAGAAAACAGAGTCTGTAAAATGTCAAGTACTACAGTTGGAAGAGAGCATTAAAAAATTGGAGGATAAAATTCATCATGCAGAGGAAACGATGAAAGATTTGCGGAAGCTGCAAGAGCAGATATCAACTAAAACTGCTCAACGAAGCACCCTGCTTAAGGAACAAGAGAAACAACATGCAGCTCTTGTTGAGGAGAATGTAGATTCTGATGAATTATTGATGGAATGGAAGACCAAGTTTGAAGAAAGGATTGCAATTTTAGAAGCAAAGATAAGAAAGTTGGAAAGAGAATTGAATGACGCTGCGGAGAAAGGTACTGCCCTCACGAATATCATTGGTCATTCCATCAAAGAGATTGCCAAACTACAAGCTGAAGCAGAAGCTCACATGTCTTTGAAGAATGACCGTGATTCCTCCATTCACGATCTTTTTGCTACATATAGTTTAGGATCTCTTCCAAATTCTCCTTTCAGTGACGAGGTTGCTTTAAATCTCACTAGTCGTGTAAAATCAAGGTTGGCAAATCTTGTGAAAGATCTGGATGATAAAAAGAAAGCAAATGACAACGAACTTGAGATGGGATGGGATTGCTACATGAATGCTAATGACCGTTGGAAAGATACTGAGGCTAAAATAAAGGCTATGCAAGGGATCAAGGATGGCATTCTGAAGCGCATCGAGGAGAAGAAAAATGAGCTTGATTCATCTGAACTTCAAATGACTAACTTGAACTTCTCTCACATAGACGAAAGAGAAAGAAATTTGAGAAATGAGATTGAGAGGAAGGAAAGTCAACTATCTCAAAGACAATTTGAACCAAATATACGTCAAGTGCAAAATGAGATATATAGTGTAGATCAAAAGATTAGGGCTGTCAATAGAGAGAAGGATATCATGACTTCTGATTCAGAGGACAGAGTTATGCTATCTCATAAGAAAGCTGAGTTGGAAAATCGGAAGAAGAAACATAAAAAAATATTTGATGAACAAAAGGACAAAATTAGAAAGGTGCTAAAAGGGAGGGTTCCTCTTGATAAGGATGTGAAAAAGGAAATTACTCAAGCATTAAGGGCTGTTGGAGCGGAATTTGATGATCTGAATGCAAAGTACCGTGATGCTGAGAAGGAAGTCAATATGTTGCAAATGAAAATACAAGAAGTTAATGGTAACCTATCCAAGCACCACAAGGATTTGGAATCAAGAAAGAGATTTATTGAATCCAAGCTTCAGTCTTTGGATCAGCAATGTTCTGGACTTGATTCTTATCTCAAAGTTTTAGAGTCTTCCAAGGAGAAAAGAGATGTCCAGAGAAGCAAATATAATATCGCTGATGGTATGCGGCAAATGTTTGATCCTTTTGAAAGGGTTGCTAGAGCTCATCATGTTTGCCCTTGCTGCGAGCGCCCTTTCTCTCCAGAAGAAGAAGACAATTTTGTCAAGAAGCAAAGAGTGAAGGCAGCTAGTTCAGCTGAACATATGAAAGTTCTCGCTGTGGATTCCTCAAATGCAGAGTCTCATTATCAGCAGCTGGACAAGCTTCGGATGGTTTACGAAGAATATGTTAAACTTGGCAAGGAGACCATCCCTAATACTGAAAAGGAACTTCAGCAACTTAAAGATGAGATGGATGAGAAATATCAGGCTCTTGATGATGTTTTAGGTGTTCTAGCACAAGTGAAGACTGACAAGGATTTAGTTGACGCATTGGTGCAACCTGCTGAAAATGCTGACAGGCTTTTCCAAGAAATTCAAGATTTGCAAAAGCAAGTTGAGGATTTAGAAGATAAGCTTGATTTTCGAGGACAGGGAGTGAGGACTCTGGAAGAGATTCAACAGGAGCTTAACACACTGCAGAGCACTAAGGACAATTTTCAATCTGAGTCGGAGAGGTTGAGGGAAGAACAAAGACATATGGAGAACGATCTATCAAATATTCGTATACGGTGGCACAATCTAACGAAGGAGAAAATGAAAGCAACCAACATATTGCAAGGTGTTAAGAGATTAGAAGAAGAGTTGGAACGTTTATCTGAAGAAAAGACTCAAGTTGATCTTGATGAGAAGCATTTGGCAGATGCTCTCGGACCTTTTTCCAAGGAGAAAGAAAAATTACTGGCTAATTATAATGAAATGAAAATTAGACTCAACCGTGAGTACGAGGACCTGGCTGAGCAAAAAAGAAGTTATCAGCAAGAAGCTGAATCACTTTTCAGAACGAATTCTAAGATCAAAGAGTATTCCGATTTAAAGAAAGGAGATAGGTTGAAGGAACTGCAGGAGAAAAATTCTCTATCACAATCTCAACTTCAAAGTTGTGAGACCAGGAAGCAGGAAATTTTAGCTGAGCTAGTCAAAAGTAAAGATTTGATGCAAAATCAAGATCAGTTAAGAAGAAAAATTGATGACAACTTAAATTATAGGAAAACTAAGGCTGAAGTAGATGAGCTAGCACATGAAATTGAAACACTGGAAGAAAATATATTGAAGGCTGGTGGACTCTCCACAATTGAAACTGAACGCCAGAAACTATCACAGGAGAGGGAGAGACTTCTTTCAGAGGTAAACAGGTGTCGTGGAACAATGTCTGTTTACCAAAGCAATATTTCCAAAAATAAGGTTGATCTTAAGCAGGCTCAATACAAGGACATAGATAAGCGATACTTCGACCAGCTTATACAGCTTAAGACAACTGAAATGGCCAACAAGGATCTGGACAGATACTACAATGCACTTGATAAGGCACTGATGCGCTTCCACACAATGAAAATGGAAGAGATCAACAAAATTATTAGGGAGTTGTGGCAGCAAACCTATAGAGGGCAAGACATAGACTACATTAGTATTCATTCAGACTCCGAAGGTGCAGGGACCCGTTCCTACAGTTATAAGGTTATTATGCAGACTGGTGACGCAGAGTTGGAAATGAGAGGAAGATGTAGCGCTGGTCAGAAGGTTCTGGCATCTCTTATCATAAGGTTGGCACTAGCTGAAACGTTTTGTCTCAATTGTGGAATACTTGCGCTGGATGAACCTACCACAAATTTGGATGGACCAAATGCTGAAAGTCTGGCTGCAGCCCTTGTAAGGATCATGGAGGACAGGAAAGGTCAGGAAAATTTTCAGCTAATTGTAATCACTCATGATGAGCGTTTTGCTCAACTGATTGGTCAGCGCCAGCATGCAGAGAGATATTATCGTGTCGCCAAAGATGATCTTCAGCACAGTATAATCGAAAGTCAGGAGATATTTGACTGA 3951 0.4085 MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCVRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKEQAQEIKTYKLKLEHLQTLKDAAYKLRESIAQDEEKTESVKCQVLQLEESIKKLEDKIHHAEETMKDLRKLQEQISTKTAQRSTLLKEQEKQHAALVEENVDSDELLMEWKTKFEERIAILEAKIRKLERELNDAAEKGTALTNIIGHSIKEIAKLQAEAEAHMSLKNDRDSSIHDLFATYSLGSLPNSPFSDEVALNLTSRVKSRLANLVKDLDDKKKANDNELEMGWDCYMNANDRWKDTEAKIKAMQGIKDGILKRIEEKKNELDSSELQMTNLNFSHIDERERNLRNEIERKESQLSQRQFEPNIRQVQNEIYSVDQKIRAVNREKDIMTSDSEDRVMLSHKKAELENRKKKHKKIFDEQKDKIRKVLKGRVPLDKDVKKEITQALRAVGAEFDDLNAKYRDAEKEVNMLQMKIQEVNGNLSKHHKDLESRKRFIESKLQSLDQQCSGLDSYLKVLESSKEKRDVQRSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSPEEEDNFVKKQRVKAASSAEHMKVLAVDSSNAESHYQQLDKLRMVYEEYVKLGKETIPNTEKELQQLKDEMDEKYQALDDVLGVLAQVKTDKDLVDALVQPAENADRLFQEIQDLQKQVEDLEDKLDFRGQGVRTLEEIQQELNTLQSTKDNFQSESERLREEQRHMENDLSNIRIRWHNLTKEKMKATNILQGVKRLEEELERLSEEKTQVDLDEKHLADALGPFSKEKEKLLANYNEMKIRLNREYEDLAEQKRSYQQEAESLFRTNSKIKEYSDLKKGDRLKELQEKNSLSQSQLQSCETRKQEILAELVKSKDLMQNQDQLRRKIDDNLNYRKTKAEVDELAHEIETLEENILKAGGLSTIETERQKLSQERERLLSEVNRCRGTMSVYQSNISKNKVDLKQAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVIMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALVRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAERYYRVAKDDLQHSIIESQEIFD 1316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g03044 1316 Coils Coil 309 343 - -
Phco2g03044 1316 Coils Coil 1038 1058 - -
Phco2g03044 1316 FunFam DNA repair protein RAD50 3 300 - -
Phco2g03044 1316 Coils Coil 987 1007 - -
Phco2g03044 1316 Coils Coil 545 565 - -
Phco2g03044 1316 Coils Coil 588 622 - -
Phco2g03044 1316 Pfam AAA domain 7 256 IPR038729 GO:0006302|GO:0016887
Phco2g03044 1316 Coils Coil 891 918 - -
Phco2g03044 1316 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 297 IPR027417 -
Phco2g03044 1316 Coils Coil 627 647 - -
Phco2g03044 1316 Coils Coil 197 217 - -
Phco2g03044 1316 Gene3D - 4 290 IPR027417 -
Phco2g03044 1316 Coils Coil 507 527 - -
Phco2g03044 1316 Coils Coil 839 880 - -
Phco2g03044 1316 Coils Coil 1065 1092 - -
Phco2g03044 1316 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 1286 IPR027417 -
Phco2g03044 1316 Coils Coil 808 828 - -
Phco2g03044 1316 PANTHER RAD50 1 1314 - -
Phco2g03044 1316 Coils Coil 930 971 - -
Phco2g03044 1316 Coils Coil 451 497 - -
Phco2g03044 1316 NCBIfam rad50 3 1309 IPR004584 GO:0000723|GO:0005634|GO:0006281|GO:0016887|GO:0030870
Phco2g03044 1316 Coils Coil 753 784 - -
Phco2g03044 1316 Pfam Rad50 zinc hook motif 688 724 IPR013134 -
Phco2g03044 1316 Coils Coil 235 286 - -
Phco2g03044 1316 Gene3D - 1040 1315 IPR027417 -
Phco2g03044 1316 FunFam Os02g0497500 protein 1118 1315 - -
Phco2g03044 1316 ProSiteProfiles Rad50 zinc-hook domain profile. 648 747 IPR013134 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g03044 2 58952877 58962871 Phco2g03044 2 58952877 58962871 ECH