Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g03032 ATGGCATTGCCAATGTTGTCATCTGCTTCTGTCATCTTTCACTCCCCCAACTGCACTTCCCTTCCAATCCCACACACTTCACATTTTGTTCGCCGCCTTCCATGTCACAACTCACTCTCTCCCCACCCTTCTTCACATCACCTTCGTTTACCATGGGGGAGAGAGTCACCAAGCGCAAGGATATGTGCTTCAGTTACAGATGTTTCGGTGGATGTAGCTGTAGAGGAAAAAAGGCTCCCCAAAGGAGAAACTTGGTCTGTTCACAAGTTTGGTGGAACCTGTGTGGGAAACTCATCGAGAATAAAGAATGTTGCGGACATAATTATTAATGATGATTCTGAGAGGAAATTTGTTGTGGTCTCTGCTATGTCAAAAGTGACAGATATGATGTATGATCTTATCTACAAGGCTCAATCCCGTGACGAGTCTTATGTTTCTGCCCTGGATGTTGTTTTGGAGAAGCACAGCTCAACTGCACATGACCTAATTGCTGGAGAAGATCTTGCTGCTTTTTTATCACAGTTGCATCAAGACATCAGTGACCTCAAAGCAATGCTTCAGGCCATATACATAGCTGGTCATGCTACAGAATCCTTTACTGAATTTGTTGTGGGTCACGGAGAGTTATGGTCTGCACAGATATTGTCTTTAGTAATTAAGAAACAAGGGACTGACTGCAAATGGATGGATACGAGGGAAGTCCTTATTGTAAAACCTACTCGCTCTGATCAAGTTGATCCGGATTACTTGGAATCTGAACGAAGACTTGAGAAATGGTACTCTACAAATCCATCTGATGTAATCGTTGCCACAGGATTTATTGCAAGCACACCTCAGAATATTCCTACTACTCTCAAGAGAGATGGAAGTGACTTCTCGGCAGCTATTATGGGTGCTCTCTGTAAGGCCCGTCAGGTCACAATTTGGACAGATGTAGACGGCGTGTATAGTGCAGATCCTAGAAAAGTCGGTGATGCTGTGATTTTGAAGACATTGTCTTATCAAGAAGCATGGGAAATGTCTTATTTTGGTGCCAATGTCTTACATCCACGCACAATAACTCCAGTTATTCGATATGGCATACCAATCATAATAAGGAATATTTTCAACCTTTCTTCTTCTGGAACAATGATCTGCCATCCTTCTATTATTGGTGATGAAGATAGGCTGAAGTTAAAAAATTATGTCAAAGGCTTTGCAACCATAGATAACTTGGCACTCGTAAATGTCGAGGGAACCGGAATGGCTGGTGTTCCTGGAACTGCTAGCGCTATTTTTGCTGCAGTAAAAGAGGTTGGAGCGAATGTTATTATGATATCACAGGCTAGTAGTGAGCATTCTGTGTGCTTTGCTGTTCCTGAGAAAGAAGTAAAAGCCGTTGCCGAGGTGTTGCAGTCTTTATTTGATGGCGCTTTGAATGTTGGTCGTCTTTCTCAGGTTGCAGTCCTTCCAAATTGTAGTATTTTGGCAGCTGTCGGCCAGAAAATGGCAAGTACTCCTGGAGTTAGTGCCACCCTTTTCGATGCATTGGCAAAGGCCAACATAAATGTACGTGCAGTAGCACAAGGTTGTTCTGAGTACAACATCACCGTAGTTATAAAGCGGGAGGATTCTATAAAGGCTTTACGAGCTGTTCATTCCAGATTTTATCTCTCCAGAACCACCATAGCAATGGGCCTTGTTGGGCCTGGATCAATTGGAAGCACACTGCTTGACCAGCTAAGAGATCAGGCTGCAATTCTGAAAGAGGAACTTAACATTGATTTGCGTGTAATGGGGATCATGGGTTCTAAGTTGATGCTCCTTGACGATGACGAGGGCATCAACTTAGACAAATGGAGAGAACTTCGAGAAGAAAAAGGAGAAGTGGCTGATTTGGAAAAATTTGTTCGAAATGTGCATGGAAATCATTTTATACCAAACACTGTGTTGGTGGACTGCACAGCCGACACCGTCATAGCTAGCAATTACGATGATTGGCTGTGCAAAGGAATACATGTGATCACTCCCAATAAGAAGGCAAATTCAGGACCACTTAATGAGTATTTGAGGTTAAGAGCTCTTCAGAGGCAATCATACACACATTACTTCTATGAAGCCACTGTTGGAGCTGGTCTTCCAATTATCAGCACTTTACGGGGCCTTCTTGAGACTGGAGACAGAATATTGCAAATTGAAGGTATCTTCAGTGGGACTTTGAGTTACATCTTTAACAACTTCAAAGATGGCCGTCTTTTTAGTGAGGTAGTAGCTGAAGCAAGGGATGCAGGTTTTACTGAGCCTGATCCAAGGGATGACCTGTCAGGAACTGATGTTGCTAGAAAGGTGATAATTCTTGCAAGGGAATCGGGTTTGAAGCTAGAGCTTTCTGATATTCCCGTTAAAAATCTGGTGCCAGAACCACTAAGAGTTAGTGCATCAGCTGAAGAGTTTATGCAACAACTGCCAAAATTTGATCAGGAATTAGCAGAGAAATTAAAAGATGCAGAGAGTGCTGGAGAAGTGTTGAGATACGTGGGGGTGGTGGACGTGAGAAATAGCAAAGGAGTTGTAGAGCTGAGAAGATACAAGAAGGATGATCCATTTGCACAGGTATCAGGATCAGATAACATGATTGCCTTCACAACAAGAAGGTACAAAACCCAGCCTCTCATTGTTCGTGGACCTGGAGCTGGTGCCCAAGTCACTGCTGCCGGAATATTCAGTGACATCTTACGACTTGCCTCATATCTTGGTGCTCCATCATAG 2748 0.4327 MALPMLSSASVIFHSPNCTSLPIPHTSHFVRRLPCHNSLSPHPSSHHLRLPWGRESPSARICASVTDVSVDVAVEEKRLPKGETWSVHKFGGTCVGNSSRIKNVADIIINDDSERKFVVVSAMSKVTDMMYDLIYKAQSRDESYVSALDVVLEKHSSTAHDLIAGEDLAAFLSQLHQDISDLKAMLQAIYIAGHATESFTEFVVGHGELWSAQILSLVIKKQGTDCKWMDTREVLIVKPTRSDQVDPDYLESERRLEKWYSTNPSDVIVATGFIASTPQNIPTTLKRDGSDFSAAIMGALCKARQVTIWTDVDGVYSADPRKVGDAVILKTLSYQEAWEMSYFGANVLHPRTITPVIRYGIPIIIRNIFNLSSSGTMICHPSIIGDEDRLKLKNYVKGFATIDNLALVNVEGTGMAGVPGTASAIFAAVKEVGANVIMISQASSEHSVCFAVPEKEVKAVAEVLQSLFDGALNVGRLSQVAVLPNCSILAAVGQKMASTPGVSATLFDALAKANINVRAVAQGCSEYNITVVIKREDSIKALRAVHSRFYLSRTTIAMGLVGPGSIGSTLLDQLRDQAAILKEELNIDLRVMGIMGSKLMLLDDDEGINLDKWRELREEKGEVADLEKFVRNVHGNHFIPNTVLVDCTADTVIASNYDDWLCKGIHVITPNKKANSGPLNEYLRLRALQRQSYTHYFYEATVGAGLPIISTLRGLLETGDRILQIEGIFSGTLSYIFNNFKDGRLFSEVVAEARDAGFTEPDPRDDLSGTDVARKVIILARESGLKLELSDIPVKNLVPEPLRVSASAEEFMQQLPKFDQELAEKLKDAESAGEVLRYVGVVDVRNSKGVVELRRYKKDDPFAQVSGSDNMIAFTTRRYKTQPLIVRGPGAGAQVTAAGIFSDILRLASYLGAPS 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g03032 915 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 393 551 - -
Phco2g03032 915 ProSitePatterns Aspartokinase signature. 87 95 IPR018042 GO:0004072|GO:0008652
Phco2g03032 915 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 84 381 - -
Phco2g03032 915 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 718 889 - -
Phco2g03032 915 SUPERFAMILY ACT-like 477 562 IPR045865 -
Phco2g03032 915 CDD ACT_AKi-HSDH-ThrA_2 486 551 - -
Phco2g03032 915 Gene3D Dihydrodipicolinate Reductase; domain 2 718 889 - -
Phco2g03032 915 ProSiteProfiles ACT domain profile. 410 479 IPR002912 -
Phco2g03032 915 Gene3D - 557 907 - -
Phco2g03032 915 Pfam ACT domain 484 547 IPR027795 -
Phco2g03032 915 ProSiteProfiles ACT domain profile. 491 565 IPR002912 -
Phco2g03032 915 Pfam Amino acid kinase family 86 367 IPR001048 -
Phco2g03032 915 SUPERFAMILY Carbamate kinase-like 86 380 IPR036393 -
Phco2g03032 915 Pfam ACT domain 414 468 IPR002912 -
Phco2g03032 915 Pfam Homoserine dehydrogenase 707 905 IPR001342 GO:0006520
Phco2g03032 915 SUPERFAMILY ACT-like 394 469 IPR045865 -
Phco2g03032 915 CDD ACT_AKi-HSDH-ThrA-like_1 405 482 - -
Phco2g03032 915 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 554 729 IPR036291 -
Phco2g03032 915 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 557 734 - -
Phco2g03032 915 CDD AAK_AK-HSDH 85 379 IPR041743 -
Phco2g03032 915 Gene3D - 85 381 IPR036393 -
Phco2g03032 915 Gene3D - 392 551 - -
Phco2g03032 915 PANTHER - 68 915 IPR011147 GO:0004072|GO:0004412|GO:0009067
Phco2g03032 915 NCBIfam aspartate kinase 85 549 IPR001341 GO:0004072|GO:0008652
Phco2g03032 915 Pfam Homoserine dehydrogenase, NAD binding domain 562 699 IPR005106 GO:0016491|GO:0050661
Phco2g03032 915 ProSitePatterns Homoserine dehydrogenase signature. 753 775 IPR019811 GO:0006520
Phco2g03032 915 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 707 892 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g03032 Phco-Chr2 58887112 58893585 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g03032 2 58887112 58893585 Phco2g03032 2 58887112 58893585 ECH