Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02969 ATGTCGCTGGCATCGTCGTTCTCGATGCTCCGGCATCGCGCGGTGGCTTCCGCTGCTCCCTTCCTCCTGCGCCGCTTCCGGTCCCTTCCAATCGCCGCCCGGCAGCAGCAAAACCCTAACAAGCAAGCCGCCCCGAGCCGCAACCTTCTGAAGGCGAAAAAAACGTTGAAGGAGTTTTCCTCTCTCGCCCCTGTCCTCTCCCTGGAAGACAGCCCCCCGCTCACGGAATCCCAGGCCATTGGCGTCGTGGCGGCGTCGCAGGCGAACTTCATGCGCGTCATCGTTCCCGAAAACGACCAGCCTCCTTCTTCTGGAACCTTCCGCGGGGTGGAGCTTCTCTGCGTGGTGAGGGCGCTATTAAAGAAGATTAAGCGCAGGGTCATGGTCGGGGACAAGGTTCTTGTCGGTTCCGTGGATTGGGTGGATCGCAGGGGATGGATTGAGAATGTCTTCCACCGATCCTCTGAGATTCTTGACCCTCCCGTTGCCAACGTCGACCACCTTCTCGTGCTGTTCTCGCTCGATCAACCCAGGCCTGAACCGTTTACCCTTACGCGCTTTCTTGTCGAAGCTGAATCCACTGGAATCCCTCTCACGCTGGCACTCAACAAGACCGAGCTTGTGGATAAAGAGATCATTAGTTCGTGGAAGGCCAGGCTGCGCAGCTGGGGGTATGAGCCTATTTTTTGCAGCGTTGAATCTGGACATGGACTTGATCTTCTTGCATTCAAGTTGAGGGATCAAACGACGGTGATTGTGGGGCCTAGTGGAGTTGGGAAGTCTAGTTTGATAAATGCCCTTAGAAACAATTCTTCTGATGTTGCGGAAGGGGATAATTGGTTTGAGCCTATTTCGGGAAGCAAGTGGCTTGAGGATCAACGGGTTGGGGAGGTTTCCACGAGAAGTGGTAGAGGAAAGCATACTACTCGCCATGTCTCTTTGCTTCCAATATCTGGAGGGGGTTTTCTTGCTGATACTCCTGGATTTAACCAACCTAGTTTATTGAAAGTTACAAAGCAGTCTCTTGCACAAACTTTTCCCGAAATCAGGAAAATGCTTAGTGCGAATGAGACCACCGAGAAATGCTCATTTAACAATTGCTTGCATCTGGGAGAACCTGGGTGCATTGTGAAGGGAGACTGGGAAAGATATTCATTCTATTTTCAACTTCTGGATGAAATCAGAATCAGGGAAGAGTTCCAACTTAGGACATTTGGGACTAAAAGAGAAGGGGATGTAAGGTTGAAAATGGGAGATATGGGTGTTCAGCAAGCAGAACCACGGTTGGAACCTAAAAAGCACAGGAGACAATCTCGAAAGAGCATTAACCAGTCAATTTTAGATGGCATAGATGATGATGACGACGACAATTTGCTTGATGAGGAAAATGATCCCATTTTAAGGGCGCTACGGAATGAAAACTCTTAG 1428 0.5049 MSLASSFSMLRHRAVASAAPFLLRRFRSLPIAARQQQNPNKQAAPSRNLLKAKKTLKEFSSLAPVLSLEDSPPLTESQAIGVVAASQANFMRVIVPENDQPPSSGTFRGVELLCVVRALLKKIKRRVMVGDKVLVGSVDWVDRRGWIENVFHRSSEILDPPVANVDHLLVLFSLDQPRPEPFTLTRFLVEAESTGIPLTLALNKTELVDKEIISSWKARLRSWGYEPIFCSVESGHGLDLLAFKLRDQTTVIVGPSGVGKSSLINALRNNSSDVAEGDNWFEPISGSKWLEDQRVGEVSTRSGRGKHTTRHVSLLPISGGGFLADTPGFNQPSLLKVTKQSLAQTFPEIRKMLSANETTEKCSFNNCLHLGEPGCIVKGDWERYSFYFQLLDEIRIREEFQLRTFGTKREGDVRLKMGDMGVQQAEPRLEPKKHRRQSRKSINQSILDGIDDDDDDNLLDEENDPILRALRNENS 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02969 475 CDD YjeQ_EngC 163 392 IPR004881 GO:0003924|GO:0005525
Phco2g02969 475 MobiDBLite consensus disorder prediction 417 459 - -
Phco2g02969 475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 394 IPR027417 -
Phco2g02969 475 ProSiteProfiles EngC GTPase domain profile. 163 330 IPR010914 GO:0003924|GO:0005525
Phco2g02969 475 Gene3D - 152 334 IPR027417 -
Phco2g02969 475 PANTHER SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGA 50 456 IPR004881 GO:0003924|GO:0005525
Phco2g02969 475 Gene3D - 74 151 IPR012340 -
Phco2g02969 475 SUPERFAMILY Nucleic acid-binding proteins 79 153 IPR012340 -
Phco2g02969 475 NCBIfam ribosome small subunit-dependent GTPase A 127 270 IPR004881 GO:0003924|GO:0005525
Phco2g02969 475 Gene3D Probable gtpase engc; domain 3 336 399 - -
Phco2g02969 475 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 154 332 IPR030378 GO:0005525
Phco2g02969 475 Hamap Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 79 398 IPR004881 GO:0003924|GO:0005525
Phco2g02969 475 Pfam RsgA GTPase 150 334 IPR010914 GO:0003924|GO:0005525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02969 2 58540519 58543248 Phco2g02969 2 58540519 58543248 ECH