Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02963 ATGTACAGTCATGTGTCTTATCTTATCGTCGAGGAAACCAGTGAAAAGAAACTAACTAGCATGACTACCTTAGTAATTAGCGACGATGCAAAGTTCGCGGTTCAAGTGATGCCACAGCCAGAAAAATCGCTCGGTAACAACCTTCCAATAATTCGCATTCCAGGAGACGGTAGATGTTTGTTTAGGTCTGTGGTCTATGGTGCATGTCTCAGATCAGGTGAACCATCTCCAAGTCTTAGTACGCAAAAAGAACTTGCAGATGAACTTAGAGCCAAAGTTGTGGATGAATTCATCAAGAGGAGGGCAGACACTGAGTGGTTTCTAGAAGGTGACTTTGAAACATATACAGTACAGATGCGAAAGCCTCATATATGGGGAGGAGAACCTGAACTTCTCATGTCCTCACATGTTCTACAGATGCCAATAACAGTGCTCATGCAGGATAAGAATTCAAGTAACCTTAAAGTTATAGCTGAATACGGTGAGGAATATGGGAAGGACAACCCTATTCGAGTGATTTATCATGGTTATGGCCACTATGATGCATTATTGAAGAGTTCCACTGGTTTTGTGCAGTCTTAG 582 0.421 MYSHVSYLIVEETSEKKLTSMTTLVISDDAKFAVQVMPQPEKSLGNNLPIIRIPGDGRCLFRSVVYGACLRSGEPSPSLSTQKELADELRAKVVDEFIKRRADTEWFLEGDFETYTVQMRKPHIWGGEPELLMSSHVLQMPITVLMQDKNSSNLKVIAEYGEEYGKDNPIRVIYHGYGHYDALLKSSTGFVQS 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02963 193 FunFam OTU domain-containing protein 33 189 - -
Phco2g02963 193 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 43 186 - -
Phco2g02963 193 Gene3D - 35 192 - -
Phco2g02963 193 ProSiteProfiles OTU domain profile. 48 186 IPR003323 -
Phco2g02963 193 SUPERFAMILY Cysteine proteinases 47 185 IPR038765 -
Phco2g02963 193 CDD OTU_plant_OTU4-like 47 184 - -
Phco2g02963 193 Pfam OTU-like cysteine protease 54 180 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02963 Phco-Chr2 58508554 58511709 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02963 2 58508554 58511709 Phco2g02963 2 58508554 58511709 ECH