Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02962 ATGATGGTGCTGGCTAATTCTGGTTCGGGCCTTCGGAAACAGGTTTTTCCCGTGGACTACGAAACGGAGCTGTCGCGGCGTCTCGTAGACGCGGCTTATTACGGCGACACCGACGCTGCGGTTGATTGTGTCGCCAATCCCTCGGTCGACGTTAACTTCGTCGGAACGGTATTGTTTAAGTCCAAAACGACGGAGATCGTGCTGCAGGACGAGTCGCCTCACCGAGTTAACTCGGCGTACGAGGAGTTCAAGACCGACCTCACCGCTCTGTTTCTGGCCGCGCACACAGGGAATTTGACACTCCTTCGGAAGCTTCTGAATGTTGGAGCTAATGTAAATATGAGAATGTTCCGGGGCTATGCCACAACAGCATCAGTGAGAGAAGGGCATCTAAAAGTGTTGGAGGTTCTTCTCAATGCTGGGGCATCACAACTTGCATGCGAAGAGGCTTTAATGGAAGCAAGCTATTTGGGGAGGGGCAGATTTGTTGAATTACTCATGCAATCCAACATGATTCGTCCTCAGGTTGCAGTTCATGCCCTTGTCTCTGCTTGTTGCAGAGGCTTCGTTGAGGTTGTTGATGTACTCATCAAGCATGGAGTGGATGCCAATGCAATTGATAGGACTTTGCTTCAGTCTTCAAAGCCATTTCTTCATGCTAATGTTGATTGCAATGCATTATTTGCTGCTGTGGTCAGCAGACAGATTGATGTTGTTAGATTACTGTTGCAGGTTGGTGTAAGGCTTGACATGAAGGTCAAACTGGGGGCTTGGTCCTGGGACACAGATACAGGAGAAGAATTTCGTGTAGGTGTTGGACTAGCTGAGGCCTATCCAATCACCTGGTGTGCTGTGGAGTATTTTGAATCCACTGGTGCTATATTGCATATGCTGCTCTGCCATCTCTCACCTAATAGCTTACACATTGGGAGGAGTCTATTGCACCATGCTATCATTTGTAACAACGAAAAAGCTGTAAATATACTTCTAAACAATGGTGCTGATGCAGAAGTGATAGTGCAAACTACTGAAGGAACCAATGAATACCCTATTCACATAGCTGCACGGGTTGGATCATGCAACATTCTTCAGTGCCTGATTAAAGGTGGTTGTAACTTGGATTCCCAAACAAAATGTGGAGATTCAGCACTGATGATCTGCACAAGGCACAAACATGAGAAGTGCCTTGGGGTCCTAGCATCAGCAGGTGCTGATCTGGGAATGGTAAATTCATCTGGTCACTGTGCAACTTCAATTGCAAACTTTGTTCAGTGGACTAAAGTCTACCAGAAAGTGATATTGGATGTAATCAGAGCCGGGAAGGTTGTTAAATCAAGCAATGCCGCTAGATTCTCCGCTTTGTTATTTGTAACTCGTGCAAATGACATAGAGGGTTTGAAGAAACTCATTGAAAACGAAAACATCAATCTGAATGAGCAAAATGCCAACGGATTTTCTGCTGCTATGATAGCTGCTGTAGTGGGTAACGTGGAGGCTTTCAAGTTGCTTCTTTATGCAGGGGCTGATATGACTAAGCTTAGAAACAAATATGGTTTGACAGTACTTAACGTCGTAGATGTGAGCCAAAATAGTGAAGTGTTCCACAAGGTGATGCTTGAATATGCACTTAAAAGTGGAGGCGATGGTTCAATTGAAGCAAACCCTCTCCACCGTGCAACTTGCTATGGAGACATAAGTATTGTTCACAAACTACTAAAAGAAGGGTATGAAGTAAATGGTTTTGATGGTGAAGGACACACCCCTCTGATGTTAGCAGCAAGAGGATGCCGTGGTGAAATGTGTGAGCTTTTGATCTCATATGGAGCTAAATGTGATATTCAAAATGAGAGACATGAGACACCCCTTTCACTTTCCAGAGAAAATGGTGCAGGAAATGATGCTGAACGTGTGATTTTGGATGAGCTAGCTAGAAGACTGGTCTTGGGTGGAGCTCGTGTGAAGAAGCATACGAAGTGTGGCAAAGGTTCACCTCATGGTAAGTTACTAAAGATGATTGGTGCTGCTGGAATCTTACGTTGGGGAAAATCAAGTAAGAGAAATGTGATTTGTAAAGAGGCTGAGGTTGGACCAAGTGTGAAATTTCGATGGAATCGTAGGAGGAAGTTTGATGTTGAAGAACCAGGATTGTTCCATGTTGTTACTACAACAAAAGACAAGCAGGTACATTTTGTGTGTGATGGTGGTGTTGAAATGGCTGAGTTGTGGGTAAGGGGGATTAAATTAGTAACTAGAGAAGCCATTTCTGGTAGAAGAGCTCATAACGCTTGA 2289 0.4465 MMVLANSGSGLRKQVFPVDYETELSRRLVDAAYYGDTDAAVDCVANPSVDVNFVGTVLFKSKTTEIVLQDESPHRVNSAYEEFKTDLTALFLAAHTGNLTLLRKLLNVGANVNMRMFRGYATTASVREGHLKVLEVLLNAGASQLACEEALMEASYLGRGRFVELLMQSNMIRPQVAVHALVSACCRGFVEVVDVLIKHGVDANAIDRTLLQSSKPFLHANVDCNALFAAVVSRQIDVVRLLLQVGVRLDMKVKLGAWSWDTDTGEEFRVGVGLAEAYPITWCAVEYFESTGAILHMLLCHLSPNSLHIGRSLLHHAIICNNEKAVNILLNNGADAEVIVQTTEGTNEYPIHIAARVGSCNILQCLIKGGCNLDSQTKCGDSALMICTRHKHEKCLGVLASAGADLGMVNSSGHCATSIANFVQWTKVYQKVILDVIRAGKVVKSSNAARFSALLFVTRANDIEGLKKLIENENINLNEQNANGFSAAMIAAVVGNVEAFKLLLYAGADMTKLRNKYGLTVLNVVDVSQNSEVFHKVMLEYALKSGGDGSIEANPLHRATCYGDISIVHKLLKEGYEVNGFDGEGHTPLMLAARGCRGEMCELLISYGAKCDIQNERHETPLSLSRENGAGNDAERVILDELARRLVLGGARVKKHTKCGKGSPHGKLLKMIGAAGILRWGKSSKRNVICKEAEVGPSVKFRWNRRRKFDVEEPGLFHVVTTTKDKQVHFVCDGGVEMAELWVRGIKLVTREAISGRRAHNA 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02962 762 Coils Coil 460 483 - -
Phco2g02962 762 SUPERFAMILY Ankyrin repeat 28 255 IPR036770 -
Phco2g02962 762 SMART ANK_2a 222 251 IPR002110 GO:0005515
Phco2g02962 762 SMART ANK_2a 449 479 IPR002110 GO:0005515
Phco2g02962 762 SMART ANK_2a 379 408 IPR002110 GO:0005515
Phco2g02962 762 SMART ANK_2a 176 205 IPR002110 GO:0005515
Phco2g02962 762 SMART ANK_2a 483 512 IPR002110 GO:0005515
Phco2g02962 762 SMART ANK_2a 346 375 IPR002110 GO:0005515
Phco2g02962 762 SMART ANK_2a 551 580 IPR002110 GO:0005515
Phco2g02962 762 SMART ANK_2a 117 146 IPR002110 GO:0005515
Phco2g02962 762 SMART ANK_2a 584 613 IPR002110 GO:0005515
Phco2g02962 762 SMART ANK_2a 85 114 IPR002110 GO:0005515
Phco2g02962 762 SMART ANK_2a 309 338 IPR002110 GO:0005515
Phco2g02962 762 Gene3D - 17 174 IPR036770 -
Phco2g02962 762 ProSiteProfiles Ankyrin repeat profile. 309 341 IPR002110 GO:0005515
Phco2g02962 762 Gene3D - 428 538 IPR036770 -
Phco2g02962 762 Gene3D - 539 645 IPR036770 -
Phco2g02962 762 ProSiteProfiles Ankyrin repeat region circular profile. 309 338 - -
Phco2g02962 762 ProSiteProfiles Ankyrin repeat region circular profile. 85 115 - -
Phco2g02962 762 ProSiteProfiles Ankyrin repeat profile. 551 583 IPR002110 GO:0005515
Phco2g02962 762 ProSiteProfiles Ankyrin repeat profile. 483 515 IPR002110 GO:0005515
Phco2g02962 762 ProSiteProfiles Ankyrin repeat profile. 85 117 IPR002110 GO:0005515
Phco2g02962 762 PANTHER ANKYRIN REPEAT-CONTAINING 22 743 - -
Phco2g02962 762 SUPERFAMILY Ankyrin repeat 310 637 IPR036770 -
Phco2g02962 762 Gene3D - 295 427 IPR036770 -
Phco2g02962 762 ProSiteProfiles Ankyrin repeat profile. 584 616 IPR002110 GO:0005515
Phco2g02962 762 Pfam Ankyrin repeats (3 copies) 314 408 IPR002110 GO:0005515
Phco2g02962 762 Pfam Ankyrin repeats (3 copies) 540 615 IPR002110 GO:0005515
Phco2g02962 762 Gene3D - 175 262 IPR036770 -
Phco2g02962 762 ProSiteProfiles Ankyrin repeat profile. 346 378 IPR002110 GO:0005515
Phco2g02962 762 ProSiteProfiles Ankyrin repeat region circular profile. 483 510 - -
Phco2g02962 762 ProSiteProfiles Ankyrin repeat region circular profile. 584 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02962 Phco-Chr2 58497770 58502467 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02962 2 58497770 58502467 Phco2g02962 2 58497770 58502467 ECH