Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02961 ATGTTTCTTCGAGTTTATGATTACTGGAAAATGAAACTAAGTCCAAGGGAGATCGAGAAACTAGACCTGCACAATGCTGGCTACCTTGCACAGAAACGCCTTGCTCGTGGTTTAAGACTCAATTATGTTGAAACTGTGGCTCTCATAGCAACACAGATTTTGGAATTTGTTCGTGACGGTGAGATGACTGTTGCAGAGTTAATGTCCATTGGGAGAGAACTTCTGGGAAGGAGACAAGTTCTTCCATCTGTTCGACATCTTGTGGAAAGTGTTCAGATTGAAGCCACCTTTCGTGATGGGACTAAGTTAGTCACCATTCATGACCCAATCGCTTGCGAGAATGGAAACCTTGAACTTGCATTATTTGGTTCTTTTCTTCCAGTACCTTCACTCGACAAGTTTGCAGAGAACGAAGAAGATCATAGAATTCCTGGAGAAATAATATTTAGAGGTGAAAATCTGATTCTTAACTCTGGAAGGAATGCGGTAATTCTCAGAGTTGTCAACAATGGAGACAGGCCAATTCAGGTTGGAAGCCACTATCATTTTATTGAAGTAAATCCTTACTTAACCTTTGATCGAAAGAAAGCATATGGCATGCGCCTCAACATAGCAGCTGGGAATGCCACACGCTTTGAGCCAGGGGAATGTAAAAGTGTTGTACTTGTCAGCATTGGAGGCAGCAAAGTCATCAGAGGAGGTAATAGCATTGCTGATGGTCCAGTTAATGATTCCAATTGCATAGCAGCCATGGAGGCTGTGACCACAAGGGGATTTGGACATGTAGAAGAGGAAAATGCTAGGGAAGGTATTACTGGAGAAGACTATTCATTCACTACAGTAATTTCTCGAGAGGAATATGCTAACAAGTATGGCCCTACAAGTGGCGACAAAATCCGTCTGGGTGATACTGACTTGTTTGCTGAAATTGAAAAAGATTTTGCTGTCTATGGTGATGAATGTGTTTTTGGAGGTGGGAAAGTCATAAGAGATGGAATGGGTCAATCGTGTGGTCGTCCACCCGAGGATTCCTTGGATACTGTTATAACAAATGCTGTGATAATTGATTATACTGGAATTGTTAAAGCAGATGTCGGTATTAAAGATGGATTGATTTTCTCAATTGGAAAAGCAGGAAATCCAGACATTATGAATGATGTATTTCATAATATGATAATTGGGGCTAATACTGAAGTTATTGCTGGAGAGGGCTTGATTTTGACAGCTGGGGCTATAGATTGTCATGTTCATTTTATATGCCCCCAGTTAGTATATGATGCCGTAACAAGTGGTATCACAACACTAGTGGGAGGAGGAACAGGACCAGCTGATGGAACACGTGCTACAACTTGTACACCTGCCCCAAATCAGATGAAAATGATGCTACAATCAACGGATGACATGCCTTTAAACTTTGGTTTCACTGGAAAAGGGAATAGTGCCAAACCTGATGAACTACACGACATAATCAGGGCTGGAGCTATGGGACTGAAGCTGCATGAGGATTGGGGCTCTACACCGGCTGCAATAGACTGTTGTTTGTCCGTTGCAGAACAATATGATATCCAGGTTAACATACACACTGACACCTTAAACGAATCTGGATTTGTCGAAGATACAATTGCTGCATTTAAAGGAAGAACTATTCATGCTTATCACAGTGAAGGTGCAGGTGGTGGCCATGCTCCAGATATCATAAAAGTATGCGGTGTGAAGAATGTCCTGCCCTCTTCGACAAATCCCACACGCCCTTATACGGCTAATACCATAGATGAGCATCATGATATGTTGATGGTCTGCCATCATCTTGATAAGAATATTCCAGAAGATGTAGCTTTTGCAGATTCAAGAATAAGGGCTGAAACAATTGCTGCTGAAGATATTTTGCATGATATGGGGGCAATTAGCATTATATCTTCTGATTCACAGGCTATGGGTCGAATTGGAGAGGTGATATGCAGAACTTGGCAAACTGCTGATAAGATGAAGTCACAAAGAGGATCACTGCAACCTGATGAACAAAATGACAATATTCGGATCAAACGTTATATTGCAAAGTACACTATAAACCCAGCTATAGCAAATGGTTTCTCGCAATATGTTGGTTCAGTTGAGGTGGGAAAGTTAGCTGATCTTGTATTATGGAAGCCGTCATTTTTTGGAGCAAAACCAGAAATGGTGATCAAAGGTGGTGAGGTTGCATATGCTAACATGGGTGACCCAAATGCAAGCATTCCAACACCTGAACCGGTGATTATGAGACCTATGTTCGGGGCATTTGGCAAGGCTGGTTGTGCACACTCCATTGCTTTTGTGAACAAGGTAGCTTTGGACAATGGGGTAAAAGCTTCGTATGGGCTTAACAAGAGGGTGGAAGCTGTGGAAAATGTGAGGAAGCTCACCAAGCTAGATATGAAACTGAATGATGCTCTTCCAGAAATCACTGTGGATCCCGAAACATACACAGTTACAGCAGATGGAGAGGTTCTCACCTGCACCGCAGCCAAGACTGTTCCTCTCTCTACAAATTACTTCCTCTTTTAA 2544 0.4214 MFLRVYDYWKMKLSPREIEKLDLHNAGYLAQKRLARGLRLNYVETVALIATQILEFVRDGEMTVAELMSIGRELLGRRQVLPSVRHLVESVQIEATFRDGTKLVTIHDPIACENGNLELALFGSFLPVPSLDKFAENEEDHRIPGEIIFRGENLILNSGRNAVILRVVNNGDRPIQVGSHYHFIEVNPYLTFDRKKAYGMRLNIAAGNATRFEPGECKSVVLVSIGGSKVIRGGNSIADGPVNDSNCIAAMEAVTTRGFGHVEEENAREGITGEDYSFTTVISREEYANKYGPTSGDKIRLGDTDLFAEIEKDFAVYGDECVFGGGKVIRDGMGQSCGRPPEDSLDTVITNAVIIDYTGIVKADVGIKDGLIFSIGKAGNPDIMNDVFHNMIIGANTEVIAGEGLILTAGAIDCHVHFICPQLVYDAVTSGITTLVGGGTGPADGTRATTCTPAPNQMKMMLQSTDDMPLNFGFTGKGNSAKPDELHDIIRAGAMGLKLHEDWGSTPAAIDCCLSVAEQYDIQVNIHTDTLNESGFVEDTIAAFKGRTIHAYHSEGAGGGHAPDIIKVCGVKNVLPSSTNPTRPYTANTIDEHHDMLMVCHHLDKNIPEDVAFADSRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVICRTWQTADKMKSQRGSLQPDEQNDNIRIKRYIAKYTINPAIANGFSQYVGSVEVGKLADLVLWKPSFFGAKPEMVIKGGEVAYANMGDPNASIPTPEPVIMRPMFGAFGKAGCAHSIAFVNKVALDNGVKASYGLNKRVEAVENVRKLTKLDMKLNDALPEITVDPETYTVTADGEVLTCTAAKTVPLSTNYFLF 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02961 847 Hamap Urease subunit alpha [ureC]. 280 847 IPR005848 GO:0006807|GO:0009039|GO:0016151
Phco2g02961 847 NCBIfam urease subunit beta 143 243 IPR002019 GO:0035550|GO:0043419
Phco2g02961 847 SUPERFAMILY Composite domain of metallo-dependent hydrolases 689 759 IPR011059 GO:0016810
Phco2g02961 847 PANTHER UREASE 11 847 - -
Phco2g02961 847 Pfam Urease subunit beta-alpha linker domain 242 275 IPR040881 -
Phco2g02961 847 Gene3D - 410 828 - -
Phco2g02961 847 SUPERFAMILY Composite domain of metallo-dependent hydrolases 281 458 IPR011059 GO:0016810
Phco2g02961 847 SUPERFAMILY Metallo-dependent hydrolases 410 847 IPR032466 -
Phco2g02961 847 SUPERFAMILY Urease, gamma-subunit 11 114 IPR036463 GO:0016151|GO:0043419
Phco2g02961 847 NCBIfam urease subunit alpha 282 847 IPR005848 GO:0006807|GO:0009039|GO:0016151
Phco2g02961 847 PIRSF Urease 11 847 IPR008221 GO:0006807|GO:0009039|GO:0016151
Phco2g02961 847 CDD Urease_beta 143 242 IPR002019 GO:0035550|GO:0043419
Phco2g02961 847 ProSitePatterns Urease active site. 598 614 IPR017950 GO:0009039
Phco2g02961 847 FunFam Urease subunit alpha 14 134 - -
Phco2g02961 847 Gene3D Urease, beta subunit 160 279 IPR036461 -
Phco2g02961 847 NCBIfam urease subunit gamma 11 112 IPR002026 GO:0016151|GO:0043419
Phco2g02961 847 ProSitePatterns Urease nickel ligands signature. 408 421 IPR029754 GO:0016151
Phco2g02961 847 Pfam Urease, gamma subunit 11 110 IPR002026 GO:0016151|GO:0043419
Phco2g02961 847 Pfam Urease beta subunit 144 240 IPR002019 GO:0035550|GO:0043419
Phco2g02961 847 SUPERFAMILY Urease, beta-subunit 143 271 IPR036461 -
Phco2g02961 847 Pfam Amidohydrolase family 406 730 IPR006680 GO:0016787
Phco2g02961 847 CDD Urease_gamma 14 110 IPR002026 GO:0016151|GO:0043419
Phco2g02961 847 CDD Urease_alpha 282 846 IPR005848 GO:0006807|GO:0009039|GO:0016151
Phco2g02961 847 Gene3D - 14 134 IPR036463 GO:0016151|GO:0043419
Phco2g02961 847 PRINTS Urea amidohydrolase (urease) protein signature 615 631 IPR005848 GO:0006807|GO:0009039|GO:0016151
Phco2g02961 847 PRINTS Urea amidohydrolase (urease) protein signature 681 696 IPR005848 GO:0006807|GO:0009039|GO:0016151
Phco2g02961 847 PRINTS Urea amidohydrolase (urease) protein signature 576 593 IPR005848 GO:0006807|GO:0009039|GO:0016151
Phco2g02961 847 PRINTS Urea amidohydrolase (urease) protein signature 707 720 IPR005848 GO:0006807|GO:0009039|GO:0016151
Phco2g02961 847 FunFam Urease 160 278 - -
Phco2g02961 847 ProSiteProfiles Urease domain profile. 410 847 IPR017951 GO:0006807|GO:0009039|GO:0016151
Phco2g02961 847 Pfam Urease alpha-subunit, N-terminal domain 282 400 IPR011612 -
Phco2g02961 847 Gene3D Urease, subunit C, domain 1 280 760 IPR011059 GO:0016810
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02961 2 58488452 58495742 Phco2g02961 2 58488452 58495742 ECH