Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02930 ATGATCTTGGTCTTCAGTCGTATAAGTGGTGTACCTATAAATGGAGGAGAAGAAAGAGAAGGAAGAAGCTCTGCGGTCCAAAAATTTTGCATCTGCATAACTCCATTACCACTGCAGGCCTTCTGCTATATTCAAGGACCAACCCAACCGCCCGGTTCACTTCCTCCTTTAAACCGCCCGGTTCGTTGCCAACCCAATACCATGGCAGCTCTGTTACCTTACGCGCCCAACATAGTCTCTGCTCCGTTCGGGAACCGGACCACCACGCGCCTCCCCAACCGTCCTCACTCCCACGCTTTCTCCGCTTCGACCAGACACTTTCTTCGCGGTTCCCTCTCCGTCGCCCGCTTCGGATTCAAACCCGGTTTCTTGCCCGAGCCGGAGGATGCTGAAGGCTTGCTCAGAGAACTGTTTGGCCGAGCGGAGGGACTTCTTTACACGATTGCGGACGCCGCCGTTTCTTCTTCCGACACGGTTGCGCCTTCCGCCACCGCCAAACAGAGCAACGATTGGCTTTCCGGAATAACCAATTACATGGAGACGGTTCTCAAGGTACTCAAGGACGGGCTTTCTGCTTTGCATGTCCCATATGCTTATGGTTTTGCAATTATACTGCTCACGGTTCTTGTAAAAGCTGCCACTTTCCCTCTAACCAAAAAACAGGTAGAGTCCTCCTTAGCTATGCGAACTTTGCAACCTCAAATAAAGGCTATCCAGGAGCGGTATGCTGGCGATCCGGAGAGAATTCAACTTGAAACTGCTAGATTGTATAAACTAGCCAACATTAATCCTCTAGCAGGATGCCTGCCCACACTCGCAACAATACCAGTGTGGATTGGGCTATATCGAGCCCTTTCAAATGTGGCAGATGAGGGACTCCTTACTGAAGGCTTCTTTTGGATACCTTCTCTTGCTGGTCCAACTACAATTGCAGCTCGTCAAGATGGCAGTGGTATCTCTTGGCTTTTTCCTTTTGTGGATGGTCTCCCTCCCCTTGGATGGTCAGATACATTGGCTTACCTTGTCTTACCGGTGTTGCTGGTCGTCTCTCAGTACATATCTGTCCAAATAATGCAGTCATCACAGCCTAATGATCCCAACATGAAAAGTTCTCAAGTCTTGACCAAGTTCCTTCCATTAATGATTGGTTACTTTTCTCTCTCAGTTCCTTCTGGTCTTAGCCTTTACTGGTTAACAAATAATATATTGAGCACTGCACAACAAGTATGGCTTCAAAAGTTAGGAGGTGCCAAAAATCCTGTGAGGCAAGTCCCAGATGATATCATGAAGAAAGACCTAACCCAGGTTCAGAAGTCAATATCTAAACTAAATTCCACAATTCCGAAAGAAGCCAGACAAAGTGAGAAAACATCAGAGGGGCCACGAGCTGGTGATAGATTTAAGCAATTAAAGGAGCAAGAGGCAAGGAGAAGACAACAAAGAGAAGAAGAAAAAAGTAAAGGCATGGAAACAGCAGCTAGAGAAACTAAAGTAGATGAGAGTCACGAGACACTTAAGAAAACTGGAAGTGATTTAAGTGTTGAAAAATCTCTGTCTGTGGGTTCAGATACCGATCCCTCCATATCTGGAGTAGTAAATGGTAACTTATTAAGTACAGACTTGGAGGAAAATCAGAATTCTACATCTGCATCTGAGACAGAAAATAATGAAGGCTCTACTCATTTCAACAATGCTGAGATAAACGAGAAAAATTCAGACAAGGAACCAAGAGAAGTATTAACATCTACAACCACCACAAACAGACAGCCTCCTGCAGAAGATGCAGATCGCATGACAAAGGATTGA 1806 0.459 MILVFSRISGVPINGGEEREGRSSAVQKFCICITPLPLQAFCYIQGPTQPPGSLPPLNRPVRCQPNTMAALLPYAPNIVSAPFGNRTTTRLPNRPHSHAFSASTRHFLRGSLSVARFGFKPGFLPEPEDAEGLLRELFGRAEGLLYTIADAAVSSSDTVAPSATAKQSNDWLSGITNYMETVLKVLKDGLSALHVPYAYGFAIILLTVLVKAATFPLTKKQVESSLAMRTLQPQIKAIQERYAGDPERIQLETARLYKLANINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQDGSGISWLFPFVDGLPPLGWSDTLAYLVLPVLLVVSQYISVQIMQSSQPNDPNMKSSQVLTKFLPLMIGYFSLSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVRQVPDDIMKKDLTQVQKSISKLNSTIPKEARQSEKTSEGPRAGDRFKQLKEQEARRRQQREEEKSKGMETAARETKVDESHETLKKTGSDLSVEKSLSVGSDTDPSISGVVNGNLLSTDLEENQNSTSASETENNEGSTHFNNAEINEKNSDKEPREVLTSTTTTNRQPPAEDADRMTKD 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02930 601 Pfam 60Kd inner membrane protein 199 413 IPR028055 -
Phco2g02930 601 Coils Coil 467 487 - -
Phco2g02930 601 PANTHER OXA1 149 478 IPR001708 GO:0016020|GO:0032977
Phco2g02930 601 CDD UDM1_RNF168_RNF169-like 437 495 - -
Phco2g02930 601 MobiDBLite consensus disorder prediction 440 601 - -
Phco2g02930 601 MobiDBLite consensus disorder prediction 511 566 - -
Phco2g02930 601 MobiDBLite consensus disorder prediction 578 592 - -
Phco2g02930 601 CDD 5TM_YidC_Alb3 200 413 IPR047196 -
Phco2g02930 601 MobiDBLite consensus disorder prediction 452 510 - -
Phco2g02930 601 NCBIfam membrane protein insertase YidC 199 413 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02930 Phco-Chr2 58273595 58281352 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02930 2 58273595 58281352 Phco2g02930 2 58273595 58281352 ECH