Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02925 ATGAATCCTCTGTGCTGCATTGCTCCGGTTTCGATCGATCGGGAGCGGGCGAACTCGGTGGTGGCGAAATCGCCGAGTCAGTGTCAGCTAGGGCTCGATGCGGCCGTCAGGACGGTGAACTATGCTTCTAAATCGAGCTTCTCCACGCTGGATTCATCCGTTGGTGCGGATTCCGTCAAGGCATCCACTGCTGCGGATCTCGAGGAGGAGGAGGAGCCGCGCGATTCGAAGGCTTACGGAGGCGGCGTCGCCGGGAGTGTCGCCGGGATCCTGTACAAGTGGGTGAATTACGGGAAGGGGTGGAGATCGAGGTGGTTTGTGCTGGAAGATGGCGTGCTTTCGTATTACAAGATTCACGGACCGGACAAGATCTTGATGAGTCCGGCCAGAGATAGGAGCGTGAGGGTGATCGGAGAAGAGTCATCGAAGTACGTGAAGAAGGCGAATTGGAATCTGAATCGAGCACCTTCTGGAGGAGCAGGGGGAGGGAATAGTAACAACGGGAAGCAATGCAAACCGTTCGGTGAGATACATTTGAAGGTTTCTTCAGTTCGTTCCAGCAAGTCTGATGACAAGCGGCTTTCCATATTTACTGGGACAAAAACTCTCCACTTGCGGTGTGTATCTAGAGAAGACAGAGCCATGTGGATTGAGGCCTTGCAGTCTGCAAAAGATCTTTTTCCCAGAACTCTAACAAGTAGTGATCTTGCAACTTCAGAAGATATTGTGGTTTCCACAGAGAAGTTGCGATCACGATTGTCACAGGAAGGCATAAGTGAAGCAATCATTAATGACTGCGAGTCTATTATGCTTTCCGAAGTATCTTATCTCCAAAGCAAGTTGAAGTATCTTCAGCAGAAACATGTTATGCTGCTGGACACCTTAAAACAACTGGAGACAGAGAAAATAGAGTTGGAAACTACTGTAGTTGATGAAACAAAGGAACGGGAATCATATTGTGGACAAGGAAATAGAAGGTTTAGTGATTTTTATTCTGTCATGTCGGAGGGTAGTGCTACTGACTCAGTGGCGGATAATGAAAGTCAAGATGGAGCAGATGTTGAAACAGATGATGATGATAGAACATATTTTGACACAAATGAGTTTTTGTACTCTGATGCCCTGAGGAGTGCATCCTATCGAAGTAGGGAAGGTATGACCAATGGGAGTATATATGATAGAGATTATATTTGTTATGATGGTGTGCATGGGTTTGACAAGGAGATCAAAGATGTTAGGTATCCATATGTCAAAAGAAGGGATAACTTACCAGAGCCAAAAGAAAAAGAGAAGCCTGTTGGCTTGTGGTCAATTATTAAAGACAATATTGGGAAGGATCTTTCAGGAGTTTGTCTCCCTGTTTATTTTAATGAACCACTGTCTTCATTGCAAAAGTGTTTTGAAGACCTAGAGTACTCATACCTGGTTGATAGAGCATTGGAATGGGGAAAGCAGGGAAATGATTTGATGAGAATTCTAAATATTGCAGCTTTTGCTGTATCCAGCTATGCATCAACTGAAGGTAGACAATGTAAACCTTTTAATCCTTTACTTGGGGAGACTTACGAAGCTGACTATCCAGATAAAGGACTTAAGTTTTTTTCTGAAAAGGTTAGTCATCATCCAATGATTGTTGCCTGTCATTGTGAGGGAAGGGGGTGGAAGTTTTGGGCAGATTCTAATTTGAAAGGAAAATTCTGGGGGCGTTCAATACAGTTAGATCCTGTGGGTGTCCTAACTCTACAATTTGAGAATGGTGAAACATTTCAGTGGAGCAAGGTCACCACTTCCATATACAATATCATATTAGGTAAAATTTATTGTGACCACTATGGTACCATGCACATCAGGGGCAGCGGCAACTATTCTTGCAAACTGAAATTCAAGGAGCAATCTATTATAGACCGAAATCCACATCAGGTCCATGGATTTGTTCAAGACAACAGAACCGGAGAGAAGGTAGCAATGTTAATTGGGAAGTGGGATGAAGCAATGTACTATGTACTTGGGGATCCAACCACCAAGCCAAAAGGTTATGATCCGATGACAGAAGCTGCGATTTTGTGGGAAAGGGACAGCTCTGTATCCAAGACAAGATACAACCTCTCTCCTTTTGCAATTTCCTTGAATGAAATATTACCTGGTTTAGTAGACAAGTTGCCTCCGACTGACTCAAGGTTGAGACCAGATCAAAGACATTTAGAAAATGGAGAATATGAGCTGGCAAATGCAGAGAAACTAAGACTTGAACAGTTGCAGAGACAGGCAAGAAAGATGCAAGAAAGAGGATGGCAGCCAAGATGGTTTAAGAAGGATGATGATGGTTGCTACCGATATATTGGTGGGTATTGGGAAACAAGAGAAAAGAATAATTGGAATGGAATCCCTGATATATTTGGACAGAGTTGTGATTTACCTTCATGTTCCGAAGAGACTCTATCCTTCTGA 2448 0.4371 MNPLCCIAPVSIDRERANSVVAKSPSQCQLGLDAAVRTVNYASKSSFSTLDSSVGADSVKASTAADLEEEEEPRDSKAYGGGVAGSVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDRSVRVIGEESSKYVKKANWNLNRAPSGGAGGGNSNNGKQCKPFGEIHLKVSSVRSSKSDDKRLSIFTGTKTLHLRCVSREDRAMWIEALQSAKDLFPRTLTSSDLATSEDIVVSTEKLRSRLSQEGISEAIINDCESIMLSEVSYLQSKLKYLQQKHVMLLDTLKQLETEKIELETTVVDETKERESYCGQGNRRFSDFYSVMSEGSATDSVADNESQDGADVETDDDDRTYFDTNEFLYSDALRSASYRSREGMTNGSIYDRDYICYDGVHGFDKEIKDVRYPYVKRRDNLPEPKEKEKPVGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSYLVDRALEWGKQGNDLMRILNIAAFAVSSYASTEGRQCKPFNPLLGETYEADYPDKGLKFFSEKVSHHPMIVACHCEGRGWKFWADSNLKGKFWGRSIQLDPVGVLTLQFENGETFQWSKVTTSIYNIILGKIYCDHYGTMHIRGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGEKVAMLIGKWDEAMYYVLGDPTTKPKGYDPMTEAAILWERDSSVSKTRYNLSPFAISLNEILPGLVDKLPPTDSRLRPDQRHLENGEYELANAEKLRLEQLQRQARKMQERGWQPRWFKKDDDGCYRYIGGYWETREKNNWNGIPDIFGQSCDLPSCSEETLSF 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02925 815 Coils Coil 281 315 - -
Phco2g02925 815 FunFam Oxysterol-binding protein-related protein 2A 731 801 - -
Phco2g02925 815 FunFam oxysterol-binding protein-related protein 1D isoform X1 520 693 - -
Phco2g02925 815 Pfam Pleckstrin homology domain 89 222 - -
Phco2g02925 815 MobiDBLite consensus disorder prediction 338 358 - -
Phco2g02925 815 SUPERFAMILY Oxysterol-binding protein-like 429 801 IPR037239 -
Phco2g02925 815 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 87 787 IPR000648 GO:0008289
Phco2g02925 815 Gene3D - 84 227 IPR011993 -
Phco2g02925 815 Gene3D - 520 687 - -
Phco2g02925 815 SMART PH_update 85 227 IPR001849 -
Phco2g02925 815 SUPERFAMILY PH domain-like 87 225 - -
Phco2g02925 815 ProSiteProfiles PH domain profile. 84 225 IPR001849 -
Phco2g02925 815 Pfam Oxysterol-binding protein 435 788 IPR000648 GO:0008289
Phco2g02925 815 Coils Coil 742 762 - -
Phco2g02925 815 Gene3D - 731 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02925 Phco-Chr2 58246415 58252873 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02925 2 58246415 58252873 Phco2g02925 2 58246415 58252873 ECH