Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02903 ATGTTTGTTCACAAAGTTGAATTTGTTTTTTCCCATGATGGATTCCGCATTTTTGCTTTCTGGGTGCTTTTGAAGCCCACATTCTTGATGGGACTTGTTTTCACCAAATGGGCATGTGCATTCTTACTCTGCTGTTGTCTCATCACTTCTGGGGTATATTCAGTGGAGGTGTTACATGGGGGTTCTAAAGTGAGAGGAGTGAACTTAGGAGGGTGGCTGGTCATCGAAGGTTGGATCAAGCCTTCACTGTTTGATGGCATTGCCAATGGAGACATGCTAGATGGGACAGAGGTGCAATTTAAGTCAGTGACGACGCAGAAGTATGTATCTGCCGAGAATGGGGGAGGAATGAATGTGACAGTTGACAGGGATGTCCCATCTTCATGGGAAACCTTCAGGTTATGGAGGGCATCTGAATCAGAATTTCAATTTCGTACCTCAGAGGGCCAATTTCTTACGTGTGATGGTGGAGGCCACTCTGTCTCTGCAACAGCAAAATCTCCTTCAACATCTGAGACATATGAAATTGAGCGGAGTGGAAAAAATAGGATTCACATCAAGATAAAGGGTGGGGCATATCTTCAGGCTACAACCGATGGCCAGCTTTCAGCGAACTACCCTGGAACACCAGGATGGGATGATAATGCTGCCACGTTTGAAATGACAATTGTGTCAAATACCTTGCATGGAGATTACCAGCTAGCAAATGGACATGGGCATAATCGGGCAAAAGACGTTCTAAGGAGACATAGAAATAGCTTTATCACGATAGAGGATTTCAAATTTCTATATAAACATGGAATAAATACTGTGAGGATACCAGTTGGGTGGTGGATTGCTTTTGATCCTGATCCTCCGGGTCCATATATCGGAGGAAGTCTTGAAGCTCTAGATAATGCATTTTTATGGGCACAAGAATATGATATAAAATGCATAATTGACCTTCATGCTGCTCCTGGTTCCCAAAATGGAATGGAGCATAGTTCAAGCAGAGATGGATTTACGGGCTGGCCAACTTCTCCATATTACATTTCTGAGTCATTACATGTTATTGAATTTTTAGTTTCAAGATATGCAAAACATCCTTCCCTGCTGGGAATTGAGCTATTGAATGAACCATCAGCTGCCACGGTTTCATTAGATGTTTTGATTCCGTATTATAAGCTGGGCTACCAAATTGTCCGCAAATACTCGTCATCCGCTTACGTGATAATCTGCCAGAGAATTGGCGTTGCAGATCCTTTGGAACTATATCAAGCCAACATAGGATCTCACAACATAGTTTTGGATTTGCATTTCTACAATCTCTTTGACCCATTCTTTGTTAATATGAGTGCTGTGGATAATATTCAATACATATACAAAAGTCGGGAGGGTCAACTGCAAGCCTTAAACAATTCAGATGGCCCACTTGTTTTAGTTGGAGAGTGGGTTAATGAGTGGAACGTGAAAAACGGATCCCAGAAAGATTATCAGGACTTTGGAAGGGCACAGTTAGATGTCTATAATGCAGCTTCCTTTGGATGGTGTTATTGGACAGTAAAAAATGACAGAGAACACTGGGATTTTGAATGGAACATTAGGAACAGCTATCTTCAATTGGGTAACTCGTCCAGCAAACGGAGCTTGAACATTCTAGGATTGTTAGGATTTGCATTCACCTGGTTTTGTTTACTTCAATTTTTGTGA 1689 0.418 MFVHKVEFVFSHDGFRIFAFWVLLKPTFLMGLVFTKWACAFLLCCCLITSGVYSVEVLHGGSKVRGVNLGGWLVIEGWIKPSLFDGIANGDMLDGTEVQFKSVTTQKYVSAENGGGMNVTVDRDVPSSWETFRLWRASESEFQFRTSEGQFLTCDGGGHSVSATAKSPSTSETYEIERSGKNRIHIKIKGGAYLQATTDGQLSANYPGTPGWDDNAATFEMTIVSNTLHGDYQLANGHGHNRAKDVLRRHRNSFITIEDFKFLYKHGINTVRIPVGWWIAFDPDPPGPYIGGSLEALDNAFLWAQEYDIKCIIDLHAAPGSQNGMEHSSSRDGFTGWPTSPYYISESLHVIEFLVSRYAKHPSLLGIELLNEPSAATVSLDVLIPYYKLGYQIVRKYSSSAYVIICQRIGVADPLELYQANIGSHNIVLDLHFYNLFDPFFVNMSAVDNIQYIYKSREGQLQALNNSDGPLVLVGEWVNEWNVKNGSQKDYQDFGRAQLDVYNAASFGWCYWTVKNDREHWDFEWNIRNSYLQLGNSSSKRSLNILGLLGFAFTWFCLLQFL 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02903 562 Gene3D - 76 214 - -
Phco2g02903 562 Pfam Fascin domain 115 206 IPR022768 GO:0030674|GO:0051015
Phco2g02903 562 SUPERFAMILY Actin-crosslinking proteins 98 218 IPR008999 -
Phco2g02903 562 Gene3D Glycosidases 215 542 - -
Phco2g02903 562 Pfam Cellulase (glycosyl hydrolase family 5) 255 517 IPR001547 GO:0004553|GO:0071704
Phco2g02903 562 SUPERFAMILY (Trans)glycosidases 63 533 IPR017853 -
Phco2g02903 562 PANTHER FASCIN 61 534 IPR010431 GO:0007015|GO:0051015
Phco2g02903 562 ProSitePatterns Glycosyl hydrolases family 5 signature. 365 374 IPR018087 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02903 Phco-Chr2 58121143 58125885 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02903 2 58121143 58125885 Phco2g02903 2 58121143 58125885 ECH