Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02896 ATGGCATCGCATCTGCTAATTCAAATTAAGAAAACACAGTTCCAAGCATCCCGAGCCGTCAGATCTGTAACGGCCAAAAACACACGGGACGGTCATTTATACCCAACCTTTGCATTCTTCTCTTCAAGTTTCGGCTTTGGATCAGGAAACCGAAGTCCTAAGAGGTTATTGTCATTGGCACAGATGGCCCGTACAAAACAAACTGCTCGTAAATCAACTGGTGGAAAAGCTCCCAGGAAGCAGCTTGCTACCAAGGCTGCACGTAAGTCTGCGCCAACCACTGGTGGTGTGAAGAAGCCACATCGTTATCGTCCCGGTACTGTTGCTCTTCGTGAGATTAGGAAATACCAGAAGAGTACCGAGCTCCTGATCAGGAAACTCCCCTTCCAGAGGCTGGTTCGTGAAATTGCTCAGGATTTCAAGACCGATCTTCGTTTCCAGAGCCATGCTGTTCTAGCTTTGCAAGAGGCTGCCGAGGCATATCTTGTTGGGCTGTTTGAAGACACTAATTTGTGTGCCATTCACGCTAAGCGTGTGACTATCATGCCCAAGGATATCCAGCTGGCACGAAGGATTCGCGGTGAACGTGCTTGA 594 0.4865 MASHLLIQIKKTQFQASRAVRSVTAKNTRDGHLYPTFAFFSSSFGFGSGNRSPKRLLSLAQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02896 197 FunFam Histone H3.3 114 197 - -
Phco2g02896 197 Gene3D Histone, subunit A 63 197 IPR009072 GO:0046982
Phco2g02896 197 Pfam Core histone H2A/H2B/H3/H4 62 193 IPR007125 GO:0003677
Phco2g02896 197 ProSitePatterns Histone H3 signature 1. 76 82 IPR000164 GO:0000786|GO:0003677|GO:0030527
Phco2g02896 197 FunFam Histone H3 63 111 - -
Phco2g02896 197 SUPERFAMILY Histone-fold 63 194 IPR009072 GO:0046982
Phco2g02896 197 ProSitePatterns Histone H3 signature 2. 128 136 IPR000164 GO:0000786|GO:0003677|GO:0030527
Phco2g02896 197 SMART h35 95 197 IPR000164 GO:0000786|GO:0003677|GO:0030527
Phco2g02896 197 MobiDBLite consensus disorder prediction 63 102 - -
Phco2g02896 197 PRINTS Histone H3 signature 119 136 IPR000164 GO:0000786|GO:0003677|GO:0030527
Phco2g02896 197 PRINTS Histone H3 signature 159 175 IPR000164 GO:0000786|GO:0003677|GO:0030527
Phco2g02896 197 PRINTS Histone H3 signature 64 78 IPR000164 GO:0000786|GO:0003677|GO:0030527
Phco2g02896 197 PRINTS Histone H3 signature 175 196 IPR000164 GO:0000786|GO:0003677|GO:0030527
Phco2g02896 197 PRINTS Histone H3 signature 78 92 IPR000164 GO:0000786|GO:0003677|GO:0030527
Phco2g02896 197 PRINTS Histone H3 signature 95 116 IPR000164 GO:0000786|GO:0003677|GO:0030527
Phco2g02896 197 PRINTS Histone H3 signature 141 159 IPR000164 GO:0000786|GO:0003677|GO:0030527
Phco2g02896 197 PANTHER HISTONE H3 62 195 IPR000164 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02896 Phco-Chr2 58070984 58072405 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02896 2 58070984 58072405 Phco2g02896 2 58070984 58072405 ECH