Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02893 ATGACGTTCTCGGTAGTCGAAGGTGGAAGCGAAAAGGCCCAACGCGAACCCTCTGATTTGATTACCGAAAGCATGGATCTCACGGCTGCAAACCTTTCACTTACCACTGAAACATTCTTGAGAGCAGCAAATTCCCTCAAGGACAAGGTTGTGGAGGAAACTTGGAACCGGAGAGACCAGGTGGTTGATCCGACGGTGTATTCGGGACTGTTGGGCACTGCCTTCACTTGTTTGCGGTCGTACCAGGTTACCGGTTGCCGGAACGACTTGCTGTTATGCAGAGATATCGTTGACACGTGTGTCACCGCTGCACGTGCCTCCCTCAGACACGTGACCTTTTTATGCGGTAGTGGAGGCGTTTATTCGCTTGGTGCCGTCGTTGCCAATTCCATGGGGGACCTTAGAAAGCGTGACTTGTTTTTGGCTCTGTTCATTGAGGTGGCAAAAGAGAAAGCCCTACCAGTAGGACCAGAGGAAGGTGGTTTTGGAATGTCATATGATCTTCTGTATGGACGTGCTGGATTCTTATGGGGTGCATTATTCCTAAACAAGCACTTCGGAGAAGATGCAGTGCCAAAGGACATTCTTATACCTATTATTGATGCAGTTTTGGCTGGTGGTAGAGCAGGAGCATCTGATATTAAAGACTGTCCATTGATGTATAGATGGCATGGAACCAGGTACCTTGGTGCAGCAAATGGCCTTGCTGGTATCCTTCATGTGCTGCTTCATTTTCCACTTCCTACTGAGGATGCTGAGGATGTCAAGGGAACTTTGAGGTACCTCATGAGTAAGCGTTTTCCTCACAGTGGCAACTACCCCTCCAGTGAAGGGAATCCAAGGGATAAGTTAGTGCAATGGGGTCATGGTGCAACTGGCATGGCCATCACTTTGTCCAAAGCAGCACAAGTGTTTCCTAATGACAGAGAACTTCGAGATGCTGCAATAGAAGCAGGGGAAGTTGTGTGGAAAAGTGGATTGGTGAAGAAGGTGGGACTTGCAGATGGAGTATCTGGAAATGCCTATGCCTTCCTTTCCTTATACCAACTCACTAAAGAGAGCATTTACTTAGAGAGAGCAAAATCATTCGCTTCCTTCTTGTATGACAATGCAAAATCTTTGGCTCCTGCCAATGGCTACTCACTCTTCCAAGGTCTTGCTGGAACAGCATGCCTCTGGTTTGATCTGCTTGCACCCCAAAACTCTAGGTTCCCAGGTTATGAACTATAG 1230 0.478 MTFSVVEGGSEKAQREPSDLITESMDLTAANLSLTTETFLRAANSLKDKVVEETWNRRDQVVDPTVYSGLLGTAFTCLRSYQVTGCRNDLLLCRDIVDTCVTAARASLRHVTFLCGSGGVYSLGAVVANSMGDLRKRDLFLALFIEVAKEKALPVGPEEGGFGMSYDLLYGRAGFLWGALFLNKHFGEDAVPKDILIPIIDAVLAGGRAGASDIKDCPLMYRWHGTRYLGAANGLAGILHVLLHFPLPTEDAEDVKGTLRYLMSKRFPHSGNYPSSEGNPRDKLVQWGHGATGMAITLSKAAQVFPNDRELRDAAIEAGEVVWKSGLVKKVGLADGVSGNAYAFLSLYQLTKESIYLERAKSFASFLYDNAKSLAPANGYSLFQGLAGTACLWFDLLAPQNSRFPGYEL 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02893 409 PRINTS Eukaryotic LanC-like protein family signature 347 365 IPR020464 -
Phco2g02893 409 PRINTS Eukaryotic LanC-like protein family signature 196 211 IPR020464 -
Phco2g02893 409 PRINTS Eukaryotic LanC-like protein family signature 302 323 IPR020464 -
Phco2g02893 409 PRINTS Eukaryotic LanC-like protein family signature 395 409 IPR020464 -
Phco2g02893 409 PRINTS Eukaryotic LanC-like protein family signature 264 279 IPR020464 -
Phco2g02893 409 SMART LANC_like_2 60 409 IPR007822 GO:0031179
Phco2g02893 409 CDD euk_LANCL 66 405 - -
Phco2g02893 409 Gene3D - 11 409 IPR012341 GO:0005975
Phco2g02893 409 PRINTS LanC-like protein superfamily signature 331 344 IPR007822 GO:0031179
Phco2g02893 409 PRINTS LanC-like protein superfamily signature 63 81 IPR007822 GO:0031179
Phco2g02893 409 PRINTS LanC-like protein superfamily signature 284 304 IPR007822 GO:0031179
Phco2g02893 409 PRINTS LanC-like protein superfamily signature 379 396 IPR007822 GO:0031179
Phco2g02893 409 PRINTS LanC-like protein superfamily signature 228 244 IPR007822 GO:0031179
Phco2g02893 409 PRINTS LanC-like protein superfamily signature 166 181 IPR007822 GO:0031179
Phco2g02893 409 Pfam Lanthionine synthetase C-like protein 61 409 IPR007822 GO:0031179
Phco2g02893 409 PANTHER LANC-LIKE PROTEIN 31 409 - -
Phco2g02893 409 SUPERFAMILY LanC-like 53 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02893 Phco-Chr2 58055460 58060692 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02893 2 58055460 58060692 Phco2g02893 2 58055460 58060692 ECH