Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02868 ATGAGAAAAGACCCCTCACCTACTCTAGGTTATGTAAATCAAGGAAGAAAGGTTCCAAAAGAAGTTGATGGTATCTCTGATGAACTTGAAAGCATGATCAACGATCACCTAGTGTCCAACGGAGGTATTAGCCTAGCTCAAGCTTCTTCCAACAATGTGATGTTGTATGGTAATTTAGGTAACCTTAGACGAGGGGGAGTTGGATTAGATCATAAATATTATAGTGAAATGAATTACTATGTTGGTAATGTTTCAAATGGAGGACATGAATATGGTAATTGTAATTATAATAAAGAAACCAAACCAAGCAAGGAACCATCAGATTTACTATGCAGGGCTTTGTCTACAAGAATGGATCCCGAGCGATTGAAAATAATGGGCAATGAAGATTACAAGAATGGAAGGTTTTGCGAGGCATTAGCCTTGTATGATGCTGCCATAGAAATTGACCCTAATAAGGCTACTTATAGGTATAACAGAACTGTTGCACTAACTGCTCTTGGTAGGCTTTTAGAGGCTGTTTTTGAATGTAAGGAAGCCATTCAAATTGAGCCTCGTTACCATAGAGCACACAATCGATTGGGAAAATTGTACTTCAGATTAGGAGAAACAAATAAGGCTTTGTATCATTATAAACAAGCTGGACCAGAAGCTAATCCAGATGAGATTGCTAAAGTAAAGATTCTTCAAGTATATCTAAACAAATGTTCAAAGACTCATAAGTTGGGTGATTGGAACACACTTATAACTAAAACCAACATCATTCTATCATCCGGTGCAGATTCTGCTCCACAAATATATACCTTACAAGCTGAAGCCCTACTAAAGCTTCATAAACATGAAGATGCAGACAAAGTAATGTCAAAATGCCCAAAATTTGATGTTGATGAGTACACTAAGTTCTTTGGACCAATTGGTAATGCAAACTTACTGGTGAAATGGGCTCAAGTTGATTTAGTTAATGGCAGGTTTGAAAATGCCTTGCAAGCAGTAGAAAAAGCAATTAAGTTAGATCCTAATAGTAAGGAAGCAAATAAGGTGGTAAGAAAAACTCAAGCAGTCACAAATGCTCGTGCAAAAGGAAATGAGCTTTTCAAGGTTGCAAATTTTAAGGAGGCTTGCATTGCCTATGAAGAAGGCCTTGAGCATGATTTATATAACTCTGTTTTACTATGCAATAGAGCTACTTGTAGATCAAAGTTGGGCCAGTTTGATAAAGCATTGGATGATTGCACCCTTGCCCTTAACTTGCGTCCCTCTTACAGGAAGGCTAGGTTGAGAAGGGCTGATTGTAATACTAAGTTGAAAAGATGGGAAACTTCAATACAAGATTACAAAATATTGTTAAAAGAGACACCAGGAGATGAAGAAATAAAACGAGCATTGTTGAAAGCTCAAACACAGATTGAGAAACAAGATCAAGATTTTGAAAGAACTTAG 1440 0.3701 MRKDPSPTLGYVNQGRKVPKEVDGISDELESMINDHLVSNGGISLAQASSNNVMLYGNLGNLRRGGVGLDHKYYSEMNYYVGNVSNGGHEYGNCNYNKETKPSKEPSDLLCRALSTRMDPERLKIMGNEDYKNGRFCEALALYDAAIEIDPNKATYRYNRTVALTALGRLLEAVFECKEAIQIEPRYHRAHNRLGKLYFRLGETNKALYHYKQAGPEANPDEIAKVKILQVYLNKCSKTHKLGDWNTLITKTNIILSSGADSAPQIYTLQAEALLKLHKHEDADKVMSKCPKFDVDEYTKFFGPIGNANLLVKWAQVDLVNGRFENALQAVEKAIKLDPNSKEANKVVRKTQAVTNARAKGNELFKVANFKEACIAYEEGLEHDLYNSVLLCNRATCRSKLGQFDKALDDCTLALNLRPSYRKARLRRADCNTKLKRWETSIQDYKILLKETPGDEEIKRALLKAQTQIEKQDQDFERT 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02868 479 SUPERFAMILY TPR-like 120 343 IPR011990 GO:0005515
Phco2g02868 479 Pfam TPR repeat 127 168 - -
Phco2g02868 479 SMART tpr_5 264 293 IPR019734 GO:0005515
Phco2g02868 479 SMART tpr_5 422 455 IPR019734 GO:0005515
Phco2g02868 479 SMART tpr_5 308 341 IPR019734 GO:0005515
Phco2g02868 479 SMART tpr_5 388 421 IPR019734 GO:0005515
Phco2g02868 479 SMART tpr_5 120 153 IPR019734 GO:0005515
Phco2g02868 479 SMART tpr_5 154 187 IPR019734 GO:0005515
Phco2g02868 479 SMART tpr_5 188 221 IPR019734 GO:0005515
Phco2g02868 479 ProSiteProfiles TPR repeat profile. 120 153 IPR019734 GO:0005515
Phco2g02868 479 SUPERFAMILY TPR-like 358 476 IPR011990 GO:0005515
Phco2g02868 479 Pfam Tetratricopeptide repeat 390 421 IPR001440 GO:0005515
Phco2g02868 479 Pfam Tetratricopeptide repeat 322 340 IPR019734 GO:0005515
Phco2g02868 479 ProSiteProfiles TPR repeat profile. 308 341 IPR019734 GO:0005515
Phco2g02868 479 Gene3D Tetratricopeptide repeat domain 119 474 IPR011990 GO:0005515
Phco2g02868 479 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 13 474 IPR044534 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02868 Phco-Chr2 57863723 57865709 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02868 2 57863723 57865709 Phco2g02868 2 57863723 57865709 ECH