Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02865 ATGGTGTGGTGTGTGGAGTACGGTGGGGACCACAGTGATATGGGGTTGGCAACGTCGTGGGCCCCAAGTCCTATGGAAGGCCATCGTGGGCCCCACCAAGATTATTGTGTCAAAATGACGCAGCAGAATGTGGTAGTGTCTGACACCAAATCTGGAGTTTCCCTAACAGTTTTTCCAACACCTGCTCTAAAAAAGCCACCTGCAGCACCTGGAGGGTACATTTCTATTTCAAGGAGGAGGGTTTTGAAGAACCTTGAAATCAATGGAGACCAAAGAATCAATGCATGGGTTGAGTCCATGAGAGCCTCATCTCCAACCCATCTTAAATCCACACCTTCTTTGTCTCAGGAGCAAAACTCTTGGATTCTTCACCATCCGTCGGCATTAGACATGTTTGACCAAATTATGGACGCGTCAAAGGGAAAACAAATTGTCATGTTTCTGGACTATGATGGAACACTGTCCCCAATTGTTGAAGATCCTGACCGTGCTTTCATGTCTCATTCGATGAGAAAAACAGTGAGGAAACTTGCTAGGTGTTTTCCTACTGCCATAGTGACTGGCAGATGCAAAGACAAGGTATACAATTTTGTTCAGTTGGCAGAGCTATATTATGCAGGAAGCCATGGAATGGATATTAAAGGGCCAACAAGAAGCTCCAAATACAACAAAGATGCCAAAGCTGAGGCAATTCTTTTTCAACCTGCCAGCGATTTTCTTCCGATGATAGATGAGGTGTTCCAACAGTTGGTTGAGAAGACCAAATCAACTCCTGGAGCAATGGTTGAGAACAACAAGTTCTGTCTCTCTGTTCATTTTCGTTGTGTTGATGAAAAGAAATGGAGTGACCTGGCACGCCAAGTGAAATCAGTTTTAAAGGAGTACCCCAAGCTCCGACTTACCCAAGGAAGAAAGGTGCTAGAGATTCGTCCCACTATTAAATGGGACAAAGGAAAGGCCCTGGAATTTTTATTAGAGTCCCTTGGTTTGGCCAATTGTAGTGACGTCTTTCCTGTTTATATTGGCGATGATCGATCCGATGAAGATGCTTTCAAGAAATTGAGAGACAGAGGACAAGGTTTTGGCATTCTTGTCTCCAAATTTCCAAAAGACACAAGTGCATCTTACTCTTTACAAGAACCAAACGAGGTGATGAACTTTCTTCAACGCTTGGTGGAGTGGAAACATATGTCCCAACGAGCACGTTCCCGGGTTTAA 1218 0.4433 MVWCVEYGGDHSDMGLATSWAPSPMEGHRGPHQDYCVKMTQQNVVVSDTKSGVSLTVFPTPALKKPPAAPGGYISISRRRVLKNLEINGDQRINAWVESMRASSPTHLKSTPSLSQEQNSWILHHPSALDMFDQIMDASKGKQIVMFLDYDGTLSPIVEDPDRAFMSHSMRKTVRKLARCFPTAIVTGRCKDKVYNFVQLAELYYAGSHGMDIKGPTRSSKYNKDAKAEAILFQPASDFLPMIDEVFQQLVEKTKSTPGAMVENNKFCLSVHFRCVDEKKWSDLARQVKSVLKEYPKLRLTQGRKVLEIRPTIKWDKGKALEFLLESLGLANCSDVFPVYIGDDRSDEDAFKKLRDRGQGFGILVSKFPKDTSASYSLQEPNEVMNFLQRLVEWKHMSQRARSRV 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02865 405 FunFam Trehalose 6-phosphate phosphatase 144 231 - -
Phco2g02865 405 Gene3D - 245 404 IPR023214 -
Phco2g02865 405 Gene3D - 144 237 IPR023214 -
Phco2g02865 405 SUPERFAMILY HAD-like 145 394 IPR036412 -
Phco2g02865 405 NCBIfam trehalose-phosphatase 142 392 IPR003337 GO:0003824|GO:0005992
Phco2g02865 405 FunFam Trehalose 6-phosphate phosphatase 242 401 - -
Phco2g02865 405 Pfam Trehalose-phosphatase 147 381 IPR003337 GO:0003824|GO:0005992
Phco2g02865 405 CDD HAD_TPP 145 386 - -
Phco2g02865 405 FunFam Trehalose 6-phosphate phosphatase 236 312 - -
Phco2g02865 405 NCBIfam HAD-IIB family hydrolase 146 357 IPR006379 -
Phco2g02865 405 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 70 400 IPR044651 GO:0004805|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02865 Phco-Chr2 57847104 57849946 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02865 2 57847104 57849946 Phco2g02865 2 57847104 57849946 ECH