Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02864 ATGACAACAGTTATGGATATGTACAATAACAGTAGCATCATGCTGTCAGATTTCTTAGACCCCTGTAATGATCAAGAGCTGATGAAAGCACTTGAACCTTTTATGAAAAGTGATTCATCTACCACTTCCTCAATAACTTACCCTTCATTATCTTCTCCAAACTTCTCCTTCAGCTATGACCAAAAGTGTCTAAACCAAGCCAGTTCCATCAAACTGAACCAGCTCACCCCATCTCAAACATTCCAGATTCAAGCCCAAATCCAGGTTACACGAGCCCAGTTTCTTAGTCCAAAGCCCGTTCCCATGAAGCAGGTGGGTGGTCGTGTTCTTTCCAAGCCCACAAAGCTTTACCGTGGGGTGAGGCAGAGACACTGGGGCAAGTGGGTGGCTGAGATCAGACTTCCCAAGAATCGCACTCGTCTCTGGCTTGGTACATTCGAAACCGCTGAAGAAGCAGCTTTGGCATACGACAACGCAGCGTTTAAGCTCAGAGGAGAAAACGCGAGGCTCAACTTCCATCATCTACGTCACCATGGAGCAAGTGTCTATGGTGCGTTTGGGACCTACAAGCCTCTCCCCTCTGCAGTGGACGCCAAGCTCGAAGCCATTTGTCAAAGCTTGGCCATCAATACACACAAGGAAGAAACAGCAACCGCATCGGAGTTCGAGGATGTTAAGGTGGGGAACCAAACAGCATCCTCACCCTTGTCGGATGAATATTCTTCTTCTTGTGCTGGTTCCTCTTCACCTGAATCCGATATCACTTTCTTGGATTTCTCGGATTCTTATGAAGCAATGGACAATCTTGGGTTGGACTTGGAGAAGTACCCTTCTGTGGAGATTGATTGGGCAGCTTTATCTGAGTCATGA 870 0.4701 MTTVMDMYNNSSIMLSDFLDPCNDQELMKALEPFMKSDSSTTSSITYPSLSSPNFSFSYDQKCLNQASSIKLNQLTPSQTFQIQAQIQVTRAQFLSPKPVPMKQVGGRVLSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFETAEEAALAYDNAAFKLRGENARLNFHHLRHHGASVYGAFGTYKPLPSAVDAKLEAICQSLAINTHKEETATASEFEDVKVGNQTASSPLSDEYSSSCAGSSSPESDITFLDFSDSYEAMDNLGLDLEKYPSVEIDWAALSES 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02864 289 CDD AP2 115 172 IPR001471 GO:0003700|GO:0006355
Phco2g02864 289 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 5 287 - -
Phco2g02864 289 Gene3D AP2/ERF domain 116 174 IPR036955 GO:0003700|GO:0006355
Phco2g02864 289 FunFam Ethylene-responsive transcription factor 2 115 174 - -
Phco2g02864 289 ProSiteProfiles AP2/ERF domain profile. 116 173 IPR001471 GO:0003700|GO:0006355
Phco2g02864 289 Pfam AP2 domain 117 166 IPR001471 GO:0003700|GO:0006355
Phco2g02864 289 SMART rav1_2 116 179 IPR001471 GO:0003700|GO:0006355
Phco2g02864 289 SUPERFAMILY DNA-binding domain 116 174 IPR016177 GO:0003677
Phco2g02864 289 PRINTS Ethylene responsive element binding protein signature 139 155 IPR001471 GO:0003700|GO:0006355
Phco2g02864 289 PRINTS Ethylene responsive element binding protein signature 117 128 IPR001471 GO:0003700|GO:0006355
Phco2g02864 289 MobiDBLite consensus disorder prediction 231 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02864 Phco-Chr2 57836295 57837164 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phco2g02864 AP2 1.3e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02864 2 57836295 57837164 Phco2g02864 2 57836295 57837164 ECH