Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02857 ATGGCCAATGCACTACATAACGCCGCCATCTCCACAATCACGTTTGGAGACCAATATTCCATTTCTCGTTGCCTTTTTCCATCCCTGTCCACACTTCCTGTCAGAGCCATGCAGAAAAGAAATCACGTGGAGCTGAACAAAATGGTGGTAGTGGTAAAGGCAAAGAATAAGAGTGATTTGGATGACATAGAAGTTGATGTTTCTTTGAGCCACAGAGTTAATGCTGTCAAGCCTTCCAAAACTATGGCTATAAGTGATCATGCCACTGCTCTTTCACAAGCTGGAGTTCCCGTTATTCGCTTAGCTGCTGGAGAACCTGATTTTGACACACCCGCTGTTATAGCTGAGGCTGGGATGAATGCAATTCGTGACGGTTACACGAGATATACTCCTAATGCTGGAACCTTAGAATTGCGCCAAGCAATATGTCACAAGCTAAAAGAGGAGAATGGAATTACATATACCCCAGATGAGATTGTGGTCAGTAATGGAGCCAAGCAGAGTGTAGTTCAAGCAGTGCTTGCAGTTTGTTCCCCAGGAGATGAGGTTATTATTCCAGGTCCATTCTATGTGAGTTATCCAGAAATGGCTAGACTAGCGGATGCAAATCCTGTGATTATTCCAACCCACATATCTAATAACTTTCTTTTGGATCCGAAACTGCTTGAAGCCAACCTTACAGAAAGATCAAGACTACTTATTCTTTGTTCACCGTGTAACCCAACAGGATCTGTCTACTCTAAAAAATTACTTGAAGCGATAGCCCAAATTGTAGCAAAGCACCCCAGGCTTCTGGTTCTCTCCGATGAAATTTATGAACACATAATTTATGCACCAGCAACTCACACAAGCTTTGCATCTTTAACTGGAATGTGGGACAGAACACTAACCGTGAATGGGTTTTCCAAGACATTTGCCATGACTGGCTGGCGTCTTGGGTACATTGCTGGGCCAAAACACTTTGTTGCAGCCTGTGGGAAGATTCAAAGTCAGTTCACTTCAGGGGCTAGCAGTATATCTCAGAAAGCTGGTGTGGCTGCATTAGGACTAGGTTATGCAGGTGGGGAGGCTGTTTCTACCATGGTGAAAGCCTTCAGGGAAAGAAGGGATTTCTTGGTTGAAAGCTTTTCAAAAATGGAAGGAGTGAAAATATCTGAACCACAGGGGGCATTTTATATGTTCATTGATTTCAGCTCTTACTATGGAAGAGAAGCTGAAGGGTTTGGTTTAATTGAGAATTCTGATTCCCTCTGTCGATACCTGCTGGACAAGGGCCTGGTTGCAGTGGTGCCGGGAAGTGCATTTGGAGATGATAGATGCATCCGCATTTCTTATGCAGAATCCCTTACTGTTTTAAAGACAGCAGTAGAGAGAATTAAGAAAGCCCTTATCCCTCTAAGCTCTGCTACAATTGTTTAA 1419 0.4355 MANALHNAAISTITFGDQYSISRCLFPSLSTLPVRAMQKRNHVELNKMVVVVKAKNKSDLDDIEVDVSLSHRVNAVKPSKTMAISDHATALSQAGVPVIRLAAGEPDFDTPAVIAEAGMNAIRDGYTRYTPNAGTLELRQAICHKLKEENGITYTPDEIVVSNGAKQSVVQAVLAVCSPGDEVIIPGPFYVSYPEMARLADANPVIIPTHISNNFLLDPKLLEANLTERSRLLILCSPCNPTGSVYSKKLLEAIAQIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLTGMWDRTLTVNGFSKTFAMTGWRLGYIAGPKHFVAACGKIQSQFTSGASSISQKAGVAALGLGYAGGEAVSTMVKAFRERRDFLVESFSKMEGVKISEPQGAFYMFIDFSSYYGREAEGFGLIENSDSLCRYLLDKGLVAVVPGSAFGDDRCIRISYAESLTVLKTAVERIKKALIPLSSATIV 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02857 472 SUPERFAMILY PLP-dependent transferases 69 463 IPR015424 -
Phco2g02857 472 FunFam Aspartate aminotransferase 128 350 - -
Phco2g02857 472 PANTHER ASPARTATE AMINOTRANSFERASE 67 463 - -
Phco2g02857 472 Gene3D - 128 350 IPR015421 GO:0003824
Phco2g02857 472 Pfam Aminotransferase class I and II 97 459 IPR004839 GO:0009058|GO:0030170
Phco2g02857 472 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 300 313 IPR004838 GO:0003824|GO:0009058|GO:0030170
Phco2g02857 472 CDD AAT_like 99 461 - -
Phco2g02857 472 Gene3D Aspartate Aminotransferase, domain 1 82 457 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02857 Phco-Chr2 57778591 57782110 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02857 2 57778591 57782110 Phco2g02857 2 57778591 57782110 ECH