Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02853 ATGCGTTGGCGGTTGCTGCTATTGTTGTTGTTGGAGCTAACGGCACGTGCAATGCCGCTTTCCATCACGTTTTCCGCGCGCCTCGTTCACCGGTTCGCAGACGAAATCAAACCGGTTCGAATCCCGACCGGCGACTGGCCAGACCGGCGGAGCTTGCGCTACTACCAGATGCTTCTCGCCGACGACATTCTCAGACGCAAGATCAAACTCGGAGGCTCTCGCTTCCAGCTTCTGTTTCCTACTCACGGTAGCAAAACGTTGTCGCTGGGCAACGACTTCGGCTGGTTACATTACACGTGGATTGATATAGGAACACCGAGTACTTCGTTTCTCGTGGCGTTGGACGCAGGCAGTGATCTTCTTTGGATTCCGTGTGATTGCGTACAGTGTGCTCCTTTGTCATCGAGTTACTATTCCAATCTGGATAGAGATCTGAATGAATATAGTCCGTCTCGATCGTTATCCAGTAAGCATCTATCTTGCAGCCATCACTTGTGTGATAATGGTTCGAATTGTAAAAGTTCCCAGCAGCAGTGTCCGTACATGGTCAGTTACTTGTCAGATAATACATCGAGTTCTGGATTGTTAGTCGAGGACATACTGCATCTTCAGTCTGGTGGCGGTTTATCAAACTCGTCTGTTCAGGCTCCAGTTGTTCTTGGGTGTGGTATGAAGCAAAGTGGCGGTTACTTGGATGGGGTTGCTCCCGATGGTCTATTAGGTTTGGGACCTGGGGAGAGTTCAGTTCCGAGTTTTCTTGCTAAGTCCGGATTAATCCACAATTCTTTTTCCTTGTGCTTTAATGAAGACGATTCTGGTAGAATGTTTTTCGGGGACCAGGGACCAACCATCCAACAGTCTACTCCGTTCTTGCCTTTGGATGGATTATATTCAACGTACATTGTTGGAGTGGAGTCATCTTGTATTGGGAATACTTGTCTTAAAATGACAAGTTTTAAAGCACAGGTTGATAGCGGAACGTCTTTTACATTTCTTCCTGGCCATGCTTATGGAGCAATAGCCGAGCAGTTTGATCAACAAGTAAATGGTTCAAGATCTAGCTTTGAAGGATCTCCTTGGGAGTATTGCTATGTACCCAGTTCACAAGAATTGCCAAAGGTTCCCAGCTTAACTCTCATGTTCCAGCAGAATAACAGTTTTGTGGTCTATAATCCCGTGTTTGTATTCTATGGCAATGAGGGAGTCATTGGATTTTGTTTAGCCATACAGCCAACAGAAGGGGATATGGGAACAATTGGACAGAACTTCATGACTGGATACCGTTTGGTATTTGATAGGGAAAACAAGAAGCTAGCGTGGTCACGCTCAAATTGTCAGGATCTGAGTCTAGGTAAGAGGATGCCCCTTTCTCCAAATGAGACTTCACCAAACCCATTGCCTTCAGATGAGCAACAAAGAACGAACGGGCATGCAGTTGCTCCAGCTGTTGCTGGAAGAGCCCCCCTCAAATCTTCAGCAGCTTTATCGCGGATGATTTCATCGTGCTGGGTATATTGGCACTGCTATTTGTTTCTTCTATTTCAACTTGTGTCTGCCTCTTACTGA 1566 0.4642 MRWRLLLLLLLELTARAMPLSITFSARLVHRFADEIKPVRIPTGDWPDRRSLRYYQMLLADDILRRKIKLGGSRFQLLFPTHGSKTLSLGNDFGWLHYTWIDIGTPSTSFLVALDAGSDLLWIPCDCVQCAPLSSSYYSNLDRDLNEYSPSRSLSSKHLSCSHHLCDNGSNCKSSQQQCPYMVSYLSDNTSSSGLLVEDILHLQSGGGLSNSSVQAPVVLGCGMKQSGGYLDGVAPDGLLGLGPGESSVPSFLAKSGLIHNSFSLCFNEDDSGRMFFGDQGPTIQQSTPFLPLDGLYSTYIVGVESSCIGNTCLKMTSFKAQVDSGTSFTFLPGHAYGAIAEQFDQQVNGSRSSFEGSPWEYCYVPSSQELPKVPSLTLMFQQNNSFVVYNPVFVFYGNEGVIGFCLAIQPTEGDMGTIGQNFMTGYRLVFDRENKKLAWSRSNCQDLSLGKRMPLSPNETSPNPLPSDEQQRTNGHAVAPAVAGRAPLKSSAALSRMISSCWVYWHCYLFLLFQLVSASY 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02853 521 PANTHER ASPARTYL PROTEASES 7 438 IPR001461 GO:0004190|GO:0006508
Phco2g02853 521 PRINTS Pepsin (A1) aspartic protease family signature 417 432 IPR001461 GO:0004190|GO:0006508
Phco2g02853 521 PRINTS Pepsin (A1) aspartic protease family signature 103 123 IPR001461 GO:0004190|GO:0006508
Phco2g02853 521 PRINTS Pepsin (A1) aspartic protease family signature 321 332 IPR001461 GO:0004190|GO:0006508
Phco2g02853 521 ProSiteProfiles Peptidase family A1 domain profile. 97 441 IPR033121 -
Phco2g02853 521 Pfam Xylanase inhibitor N-terminal 98 279 IPR032861 -
Phco2g02853 521 MobiDBLite consensus disorder prediction 449 475 - -
Phco2g02853 521 Gene3D Acid Proteases 83 279 IPR021109 -
Phco2g02853 521 Gene3D Acid Proteases 282 447 IPR021109 -
Phco2g02853 521 FunFam Aspartyl protease family protein 1 83 279 - -
Phco2g02853 521 Pfam Xylanase inhibitor C-terminal 319 441 IPR032799 -
Phco2g02853 521 SUPERFAMILY Acid proteases 91 446 IPR021109 -
Phco2g02853 521 FunFam Aspartyl protease family protein 1 282 447 - -
Phco2g02853 521 MobiDBLite consensus disorder prediction 449 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02853 Phco-Chr2 57755739 57759755 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02853 2 57755739 57759755 Phco2g02853 2 57755739 57759755 ECH