Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02851 ATGTCGCCAAAATATCAGATTTTGGACAATCGTCCTATTCAGCAGTGGAAGGTTACGGAGCTGAGAGATGAGCTGAGGAGAAGGAGGTTAAGCGCCAAAGGTTTGAAGGATGATTTGGTCAAACGTTTGGATGAATGCCTTCGTCTTGAAAGGGAGGCTGAGGAGGATTCTGAAAAAGAGGAGGCCAATGGTTTTGACGATGATCATGTAGATGGGGAAAAAGAGCCTGAGGCGGTTACTGTGGATGCCGAAGTGGTTGACGCAACTAACAAGGAAAACACCCAAACATTTGAGACTGCTGAAAAGGGGAAGAGTGATGTAGTTGAACCGATTGAAACAGAAAATGTGGAAAAGGTTCCAGAGGTTGTGGATCAAGACAGCAATAAGAACGACAAGCAGGATGGTGTTACTGGCCAAGTTGACATTAAAACTAGTGTGTCAACCATGAACGAAGAAGTTGAACACGAGGACTTGCCCTCCGGTGTAGATTCAGGAAATGTGGTAGAGGAGACAAGTACTTATGCTTCTACTGTAGAAACCACAATTACAGTCACTGAAAGTGTGGTAACAGGAGTGGTAGCCAGTAGTGAGGATTCATATTGTGCAGAAAAGAATAATGAGGTTTCTGCAGCAAAGCTGGAGAATGAGGAGTCAAAGGCGCAGCTGGATGGTGAGGATACAAAGCCCCAACTGGATTCTGAGACAAAGCCCCTGCACGAGGATCCTGTGCCCGACTCTTCTGTTCCAGAAAACCAGGTATCTGAGGTCAACCCTAGTTTAGGGTCTCAAGTAAAATCTGATTCTATTTCTACTGATTCTGTGTCAATTAATCAAAAGAATGAACTAAAGGATACTATAATTACTGATAATGTCAAATTAGAACAAGATATTGTTAAGCCGGAGATGGTGGAAGAACCATCATCCAGAAATGATGTACCTGTTTCTTATGATGAATCACATTCAATGGATGTTGGAGGGCGGCATGAGAAAAAGACATCTGTTGAAGAAAATATCAATAATGTTTCAAGTCCAGACTTGAACAAGACCAATAGCAGTGATGATGTGGGGTATCCAGAAAAGTTGAATTTAGACAGAAGTTCTGGTGATGATTCCATGGAAGAGGATTTGCCTGAGACTAAGCAAATTGATTCTAAGTTTAATGTTGATGAACTTAGAGAGAAAGTGGAGAGTATTGAAGAGCCTATTGTGAAGGAGGAAAGTAGGACTATAGCTGTGGGAGATGGTGTATCTGGAGGAAAAATTGATACCCTCCAAGATATTGACATTAGTCCCGTTGCCCCAACTGAGAAACGAAAATTCCATGAGCAAGGATCGGTTGGGAGCAGTGAGCCTGCAAAAAGGCAACGCAGGTGGAACACTGAAACAGTTAAAGGTCCAGATCCACAAAGCACTACTCCCAGGCCTGCTACTACACCTAGAGATGAGCCAATATCTCTGAAACGCAACCTCTCTAGGTCTGATTCCTCTGCTACCGATGACACACCTAAAGAGCGCATTGTTCCACCCTCACAAAGGTCCCCAACTAATTCCCTCAGGATTGATCGTTTCCTCCGTCCATTTACTCTGAAAGCTGTGCAAGAACTTCTCGGTAAGACTGGGAATGTCAGCAGTTTCTGGATGGACCAAATAAAGACTCATTGCTATGTTACTTACTCGTCTGTTGAAGAAGCCATGGAGACACGGAATGCTGTGTATAATTTGCAATGGCCACCAAATGGTGGGCGACTCTTGGTTGCCGAGTATGTTGATCCTGAAGAAGTGAAAATGAAGTTAGAACCTCCTACACAGGCTGCTCCCATCAGCACTGCTGTAGTTCAGCCTGTGCCCACCACACCACAGCCAGAGCCTTCCCCTCGGCTACACAGGGAGCAGCATTCAGTTCCAACTACGCTCCCACCTCCACCACCATTGTCAAAAACCCCACCAGTAGCAAGAGATCGGCTTCCATCACCACCATCCCTTCCAGAGAAAGTTGACCAACCTATTGTCACTCTGGATGATCTCTTCCGCAAAACCATAGCAACTCCTCGGATCTACTACTTGCCTTTATCCGAAGAGCAGGTTGCTGCAAAGGGTAAAAGCATGAGGCAGTAG 2115 0.4496 MSPKYQILDNRPIQQWKVTELRDELRRRRLSAKGLKDDLVKRLDECLRLEREAEEDSEKEEANGFDDDHVDGEKEPEAVTVDAEVVDATNKENTQTFETAEKGKSDVVEPIETENVEKVPEVVDQDSNKNDKQDGVTGQVDIKTSVSTMNEEVEHEDLPSGVDSGNVVEETSTYASTVETTITVTESVVTGVVASSEDSYCAEKNNEVSAAKLENEESKAQLDGEDTKPQLDSETKPLHEDPVPDSSVPENQVSEVNPSLGSQVKSDSISTDSVSINQKNELKDTIITDNVKLEQDIVKPEMVEEPSSRNDVPVSYDESHSMDVGGRHEKKTSVEENINNVSSPDLNKTNSSDDVGYPEKLNLDRSSGDDSMEEDLPETKQIDSKFNVDELREKVESIEEPIVKEESRTIAVGDGVSGGKIDTLQDIDISPVAPTEKRKFHEQGSVGSSEPAKRQRRWNTETVKGPDPQSTTPRPATTPRDEPISLKRNLSRSDSSATDDTPKERIVPPSQRSPTNSLRIDRFLRPFTLKAVQELLGKTGNVSSFWMDQIKTHCYVTYSSVEEAMETRNAVYNLQWPPNGGRLLVAEYVDPEEVKMKLEPPTQAAPISTAVVQPVPTTPQPEPSPRLHREQHSVPTTLPPPPPLSKTPPVARDRLPSPPSLPEKVDQPIVTLDDLFRKTIATPRIYYLPLSEEQVAAKGKSMRQ 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02851 704 Coils Coil 36 63 - -
Phco2g02851 704 SUPERFAMILY RNA-binding domain, RBD 509 597 IPR035979 GO:0003676
Phco2g02851 704 MobiDBLite consensus disorder prediction 285 306 - -
Phco2g02851 704 MobiDBLite consensus disorder prediction 247 284 - -
Phco2g02851 704 Pfam RNSP1-SAP18 binding (RSB) motif 664 701 IPR032552 -
Phco2g02851 704 PANTHER SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN 3 703 - -
Phco2g02851 704 MobiDBLite consensus disorder prediction 321 335 - -
Phco2g02851 704 CDD RRM_ACINU 515 595 IPR034257 -
Phco2g02851 704 MobiDBLite consensus disorder prediction 336 356 - -
Phco2g02851 704 MobiDBLite consensus disorder prediction 396 517 - -
Phco2g02851 704 MobiDBLite consensus disorder prediction 485 501 - -
Phco2g02851 704 Pfam SAP domain 14 44 IPR003034 -
Phco2g02851 704 MobiDBLite consensus disorder prediction 207 384 - -
Phco2g02851 704 ProSiteProfiles SAP motif profile. 13 47 IPR003034 -
Phco2g02851 704 MobiDBLite consensus disorder prediction 635 656 - -
Phco2g02851 704 Gene3D SAP domain 13 63 IPR036361 -
Phco2g02851 704 SMART sap_9 13 47 IPR003034 -
Phco2g02851 704 MobiDBLite consensus disorder prediction 51 142 - -
Phco2g02851 704 MobiDBLite consensus disorder prediction 209 243 - -
Phco2g02851 704 MobiDBLite consensus disorder prediction 462 478 - -
Phco2g02851 704 MobiDBLite consensus disorder prediction 63 81 - -
Phco2g02851 704 MobiDBLite consensus disorder prediction 605 668 - -
Phco2g02851 704 MobiDBLite consensus disorder prediction 97 131 - -
Phco2g02851 704 SUPERFAMILY SAP domain 13 50 IPR036361 -
Phco2g02851 704 Coils Coil 201 221 - -
Phco2g02851 704 MobiDBLite consensus disorder prediction 358 384 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02851 2 57732813 57735643 Phco2g02851 2 57732813 57735643 ECH