Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02824 ATGGTTTCGATTGATAACGGGTTTGTGAATCCCAAAGATGAAATTGAGGAATCTAGTGGCAGTAAAGTGAAGGAGTTTGTTTCTATAGATATTTCTACAACTCAAGAAAGATTTCTGAGAAGTGAAGATTCTCAGAGAAAGCTTCAACGCGCTTTTAGTTCTTCTGTTCCTAATAGGATAAATTTTCTTAAATTTGGTTCGGCATCTGCCAAATTCAAGAGGCTTGCTATTGAGAGAGACCAGGTTTCACTATCTGTGCCTTCTCCTCTTTCAAATGGTCTAAGAGCACGGTTCAGAGGCATGCTTGCTCAGAAACTTGATGGGGGTTCGGTCAAGAAGATGTGCGTGGAGTGGATTAGAAGTCCAGTGAATATGGCCCTTTTTGTGTGGATTGCATGTGTTGCTATTTCGGGTGCTATTCTATTCCTGGTCATGACAGGCATGTTGAATGGCGTGCTTCCAAGGAAGTCTCAGAGAAATGCATGGTTTGAAATAAATAACCAAATACTCAATGCATTGTTTACACTCATCTGTTTGTATCAACACCCTAAGAGGTTCTACCACCTTGTTCTTCTAATTAGATGGAGACCAAATGACATCTCTAGACTAAGAAAGTTGTACTGCAAGAATGGTACTTACAAGCCCCATGAGTGGACACGTATGATGGTAGTGGTCATTCTCCTTCATGTTAACTGTTTTGCTCAATATGCACTTTGTGGTCTAAACTTAGGGTATACAAGGTCTGAGAGACCCGCCATCGGAGTTGGAATATGCATATCTTTTGCAATTGCTGCTCCTGCGGTTGCTGGTTTGTACACCATTCTCAGTCCACTTGGGAAGGAATATGACTGTGAAACGGATGAAGAAGTGCAGGTGCAAATTACTGGCTCTCAAAGGCAAGAGCAGCTGAGAGAGAAACTATGCGAGAACAAATATTCATTTGCATCCAAAGATCAAAGGGGTGTTGAAAATAGACCAAAGTGGAGTGGAGGAATACTTGACATTTGGAACGATATTTCCTTAACATATCTCTCACTTTTCTGCACCTTCTGTGTCTTTGGGTGGAATACGGAGAGACATGGATTTGGAAACATGTATGTCCATATTGCCACTTTTATGCTATTTTGTATGGCACCTTTCTGGATTTTTATTTTGGCTTCCGTTAACATAGATGATGACGATGTCAGGCAGGCTCTAGGAGCTGTTGGTATCATTCTTTGTTTTCTTGGTTTACTATATGGTGGATTTTGGAGGATCCAAATGAGAAAGAGGTTCAACTTACCTGCCTACGACTTCTGTTTTGGCAAACCTTCAGCTTCTGATTGCACACTTTGGCTATTCTGTTCCTGGTGCTCTCTTGCTCAAGAAGCAAGAACAGGAAATAACTACGATCTTGTAGTAGATAAGTTCTCTAGGAAACAAACTGATACTAGAAACCAACCTTCAATCTCACCTTTGGCTAGGGAAGATGTAGTAGTATCTACCAAATCTCACACAAGTTCTCTGGGTGGCAACCCTTCCCCTTATATGATGAAAACATCTAGTCCTCCAAATTCAACCAATGTCTTCAAGGGAGATTATAGTCCAGATAGTATTGTAAAAAAAGAGAATTGTGAAAGAGGTGAAGATGGAATAATGAACCCGCCGGATCCCCTATTGATCCAAAGAGAGTGA 1674 0.4098 MVSIDNGFVNPKDEIEESSGSKVKEFVSIDISTTQERFLRSEDSQRKLQRAFSSSVPNRINFLKFGSASAKFKRLAIERDQVSLSVPSPLSNGLRARFRGMLAQKLDGGSVKKMCVEWIRSPVNMALFVWIACVAISGAILFLVMTGMLNGVLPRKSQRNAWFEINNQILNALFTLICLYQHPKRFYHLVLLIRWRPNDISRLRKLYCKNGTYKPHEWTRMMVVVILLHVNCFAQYALCGLNLGYTRSERPAIGVGICISFAIAAPAVAGLYTILSPLGKEYDCETDEEVQVQITGSQRQEQLREKLCENKYSFASKDQRGVENRPKWSGGILDIWNDISLTYLSLFCTFCVFGWNTERHGFGNMYVHIATFMLFCMAPFWIFILASVNIDDDDVRQALGAVGIILCFLGLLYGGFWRIQMRKRFNLPAYDFCFGKPSASDCTLWLFCSWCSLAQEARTGNNYDLVVDKFSRKQTDTRNQPSISPLAREDVVVSTKSHTSSLGGNPSPYMMKTSSPPNSTNVFKGDYSPDSIVKKENCERGEDGIMNPPDPLLIQRE 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02824 557 NCBIfam uncharacterized Cys-rich domain 327 459 IPR006461 -
Phco2g02824 557 MobiDBLite consensus disorder prediction 497 557 - -
Phco2g02824 557 Pfam Protein of unknown function (DUF2985) 117 195 IPR021369 -
Phco2g02824 557 MobiDBLite consensus disorder prediction 497 526 - -
Phco2g02824 557 PANTHER PLAC8 FAMILY PROTEIN-RELATED 5 557 - -
Phco2g02824 557 MobiDBLite consensus disorder prediction 529 543 - -
Phco2g02824 557 Pfam PLAC8 family 328 458 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02824 Phco-Chr2 57582489 57584162 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02824 2 57582489 57584162 Phco3g00797 3 6592855 6595070 ECH
Phco2g02824 2 57582489 57584162 Phco2g02824 2 57582489 57584162 ECH
Phco2g02824 2 57582489 57584162 Phco3g00797 3 6592855 6595070 PCT