Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02772 ATGGCTTCCAGAGGAACTGGAACGCTGATTTGGGTGTGTCTGTTATGGCTTTTCTTCCTCTGCGCCACCATTGCTTTCTTTCAACTCCACTTGGTAGACAACAGAACCAATCAACCTTCCTCTCGCAGTAATCTCATCAAGACTCAACAGCGCTCAGATTCGGAGGGTGTCACTCACAAGGTGTATTTCGATATAGAGATCCATGGGAAATTAGCGGGTCGCATAGTCATCGGCCTTTTTGGGAACACAGTTCCGAAAACTGTAGAAAACTTTCGAGCGCTTTGTACTGGAGAGAAAGGAAAGGGAAGAAGTGGGGAGTCTCTTCATTATAAAGGAAGCACATTCCACAGGATTATACCAAGCTTTATGGTCCAGGGTGGTGATTTCACGCGTGGTGATGGAAGAGGTGGAGAATCAATCTATGGTGATAAGTTTGCTGATGAAAACTTCAAGCTGAAGCATTCTGGACCAGGATACTTATCTATGGCGAATTCAGGGCAAGACACCAATGGCTCCCAGTTTTTCATAACCACAGTTAAAACCAGCTGGCTGGATGGACGCCATGTTGTATTTGGCAAGGTACTTTCTGGTATGGACGTCCTGTACAAGATTGAAGCAGAAGGAAGTGAAAGTGGCTCGCCTAAGAACAAGGTCGTCATATCAGACAGTGGAGAATTAACTTCTTGA 687 0.4541 MASRGTGTLIWVCLLWLFFLCATIAFFQLHLVDNRTNQPSSRSNLIKTQQRSDSEGVTHKVYFDIEIHGKLAGRIVIGLFGNTVPKTVENFRALCTGEKGKGRSGESLHYKGSTFHRIIPSFMVQGGDFTRGDGRGGESIYGDKFADENFKLKHSGPGYLSMANSGQDTNGSQFFITTVKTSWLDGRHVVFGKVLSGMDVLYKIEAEGSESGSPKNKVVISDSGELTS 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02772 228 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 60 226 - -
Phco2g02772 228 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 63 222 IPR002130 GO:0000413|GO:0003755
Phco2g02772 228 MobiDBLite consensus disorder prediction 214 228 - -
Phco2g02772 228 FunFam Peptidyl-prolyl cis-trans isomerase 54 227 - -
Phco2g02772 228 Gene3D - 46 228 IPR029000 -
Phco2g02772 228 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 62 225 IPR002130 GO:0000413|GO:0003755
Phco2g02772 228 CDD cyclophilin_ABH_like 59 224 - -
Phco2g02772 228 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 158 173 IPR002130 GO:0000413|GO:0003755
Phco2g02772 228 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 186 201 IPR002130 GO:0000413|GO:0003755
Phco2g02772 228 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 79 94 IPR002130 GO:0000413|GO:0003755
Phco2g02772 228 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 173 185 IPR002130 GO:0000413|GO:0003755
Phco2g02772 228 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 115 127 IPR002130 GO:0000413|GO:0003755
Phco2g02772 228 MobiDBLite consensus disorder prediction 209 228 - -
Phco2g02772 228 SUPERFAMILY Cyclophilin-like 57 226 IPR029000 -
Phco2g02772 228 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 110 127 IPR020892 GO:0003755|GO:0006457
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02772 Phco-Chr2 57171771 57174332 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02772 2 57171771 57174332 Phco2g02772 2 57171771 57174332 ECH