Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02756 ATGGCGGTGAAACTGACGAAAGCGCAGAAGAAGATAGCGTACGATGCGAAGCTGTGTCGACTTCTGGATAACTACACCCAAATTCTGGTGGTGGCTGCGGACAACGTGGGATCCAACCAGCTTCAGAACATCCGACAGGGTCTACGTGGCGACTCCATTGTGCTCATGGGAAAGAACACCATGATGAAACGCTCTGTTAAACTCCATGCTGAGAGCACCGGCAACAATGCCTTCCTCAATCTTGTTCCACTTCTCGTGGGTAATGTGGGGTTGATTTTCACCAAAGGTGACTTGAAGGAGGTTAGCGAAGTGGTTGCTAAATACAAGGTGGGAGCTCCTGCTCGTGTTGGGTTGATTGCACCTATTGATGTTGTGGTTCCTCCAGGCAACACAGGGTTGGATCCCTCTCAAACTTCTTTCTTCCAGGTGTTGAACATTCCTACCAAAATTAACAAGGGTACTGTGGAAATTATCACCCCTGTGGAACTCATTAGGAAGGGTGAGAAGGTTGGGTCTTCTGAGGCTGCATTGCTTTCGAAGCTTGCTATAAGGCCCTTCTCTTATGGCCTTGTTGTGGTTTCTGTTTATGAGAACGGTTCGGTGTTTAGCCCTGCGGTTCTTAACCTCACTGATGATGACCTCGTTAATATGTTTGCTAATGGTGTTTCCATGGTCTCTTCACTGTCGTTGGCTATCTCCTACCCAACAATTGCAGCTGCACCACACATGTTCGCCAATTCCTACAAGAACGTCCTCGCTGTCGCAGTCGCAACAGAATATTCCTTCCCCGAGGCTGACGAGGTTAAGGAGTTCTTGAAGGATCCTAGTAAATTTGCAGTAGCTGTTGTCGCCGCAGCTGCTACTGATTCTGCTCCAGCGGCTGCCTCCAAGGAGGAGGAAAAGAAGGAAGAACCAGAAGAATCTGATGATGACATGGGCTTCAGTTTTTGTGAACCGCCCGAGCGACCTGATGTGTCTACCTTTGACCGACAGCTTAAAACAGTGGATGTGGTGGAGTGCGGGCGCAGTCGTTTTCCCACAAAGCACGGCCAAATTGGGCAGTTTGTCACAAAGAAACTTCACTCATCTGTACCAAATAACCATTCGCATTCTGCGTATCTAGTCTTCTCCTACATTTCACTACTCTTTATGGAATCCACACTATCCATATCTACGTTCCATCTTCTTATATATAGTTACTGTGCATCTGCCCAAAGAAAGTCTTCGTGCATATTACTTAAGACTGAGTTAAAGGCCAACCGAGCGCCGAATGATTGGACACAGAACAAGAGGATTGTGAAAAAGCGGTGGTCTTCTTCTTCATGCCCCCAACATTCCCAGTCCACACGTCTTTCAAATTTCACAACACCATCACTCCTCTCCTTCCTTCCATATAAATACCCTTCCCTCTTCCCTCCTCCCTCCCCACTTTCAATTCCACATCACAACATTACTTCCCTTCTCTCATACACGCAACAACACAAAACTCCCAAAATGGTTGATTTACATTGGAAATCAAAGATGCCCGCTTCCGACATGTCTTCCAAATCTCCAAAACTCTCGCTCTCCGTCAACTCCTTACCCTCTTTGCAACTACCCTTCCGCACCACAGACATATCTCCCGCTGCACCTTCACTCTGTGCTGCATACGATTACTATCTCTCTCTTCCACAACTCAGAACCCTTTGGAATTCCATAGACTTTCCCAATTGGGCCAACGAACCAATTTTAAAACCTGCCTTGCAAGCTTTAGAAGTCACCTTCCGTTTTCTTTCCATTGCTTTCTCCGATACCAGGCCTCATTCCAACCGAAGAGAATGGAAACGTACGATAGAGTCCCTCGCTATTCATCAGATAGAGATCATAGCCATGCTATGCGAAGACGAGGAGCACAATTCTCAGACACGTGGCGCCGTCCCAACCGCTGATCTCACTGTACATACCACCAACAGCGAGACCCGAAGCTACAGCGAGGCCAGCCTTCTTCCACGGCTTGCCACGTGGTACAAATCCAAGGACGTGGCGCAGAGGATTCTTCTCACCGTGGAATGCCAAATGCGGAGGTGTAGCTACACCCTAGGTTTAGGAGAGCCCAACCAGGCGGGGAAACCGAGCCTGCTCTACGATCGCGTCTGCAAACCAAATGAAATCCACGCGCTTAAGACTACGCCTTACGATGAGCGCGTGGAGAACCACGAGAACCACGCGGTGCATGCCACGCTTCAGATCGCTGAGTCCTGGATCCACACCTCGCGGAAGCTTCTTGAGAGGATCGCCGATGCTATCCTCTCCAAAAGGTTGGAGCAGGCGGCGCAGGACTGCCACGCGGTGGAGCGCATCTGGAAGCTTCTTGCGGAGGTGGAGGATCTCCACCTGATGATGGATCCGGACGAATTATTGCGTTTGAAGAACCAGCTCTCGGTGCGCTCGTCGAGCGGCGAAACGGCGTCTTTTTGTTTCAGATCGAAGGAATTGGTGGAACTAACGAAAATGTGCAGAGATCTGAGGCACAGGGTGCCGGAGATATTGGAGGTGGAGGTGGATCCAAAGGGAGGACCGAGGATTCAAGAAGCGGCGATGAAACTGTACGTCTCGAAGATCGCGTTCGAGAAGGTTCACGTGTTGCAGGCGATGCAGGCGATTGAAGCGGCGATGAAGAGGTTCTTCTACGCGTATAAGCAAGTTTTGACGGTGGTGATGGGGAGTTCGGAGGCTAACGGCAACCGAGTTGGACTGAGTTGCGACTCGGTTCACTCGTTGACTCAGTTATTCCTTGAACCGACGTACTTTCCAAGCTTGGATGCCGCCAAGACTTTCCTTGGTTACTTCTGGGATAATAGCGATAACAAGTGTTAG 2856 0.4965 MAVKLTKAQKKIAYDAKLCRLLDNYTQILVVAADNVGSNQLQNIRQGLRGDSIVLMGKNTMMKRSVKLHAESTGNNAFLNLVPLLVGNVGLIFTKGDLKEVSEVVAKYKVGAPARVGLIAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGEKVGSSEAALLSKLAIRPFSYGLVVVSVYENGSVFSPAVLNLTDDDLVNMFANGVSMVSSLSLAISYPTIAAAPHMFANSYKNVLAVAVATEYSFPEADEVKEFLKDPSKFAVAVVAAAATDSAPAAASKEEEKKEEPEESDDDMGFSFCEPPERPDVSTFDRQLKTVDVVECGRSRFPTKHGQIGQFVTKKLHSSVPNNHSHSAYLVFSYISLLFMESTLSISTFHLLIYSYCASAQRKSSCILLKTELKANRAPNDWTQNKRIVKKRWSSSSCPQHSQSTRLSNFTTPSLLSFLPYKYPSLFPPPSPLSIPHHNITSLLSYTQQHKTPKMVDLHWKSKMPASDMSSKSPKLSLSVNSLPSLQLPFRTTDISPAAPSLCAAYDYYLSLPQLRTLWNSIDFPNWANEPILKPALQALEVTFRFLSIAFSDTRPHSNRREWKRTIESLAIHQIEIIAMLCEDEEHNSQTRGAVPTADLTVHTTNSETRSYSEASLLPRLATWYKSKDVAQRILLTVECQMRRCSYTLGLGEPNQAGKPSLLYDRVCKPNEIHALKTTPYDERVENHENHAVHATLQIAESWIHTSRKLLERIADAILSKRLEQAAQDCHAVERIWKLLAEVEDLHLMMDPDELLRLKNQLSVRSSSGETASFCFRSKELVELTKMCRDLRHRVPEILEVEVDPKGGPRIQEAAMKLYVSKIAFEKVHVLQAMQAIEAAMKRFFYAYKQVLTVVMGSSEANGNRVGLSCDSVHSLTQLFLEPTYFPSLDAAKTFLGYFWDNSDNKC 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02756 951 Gene3D - 114 185 IPR043164 -
Phco2g02756 951 Gene3D - 6 209 IPR043141 -
Phco2g02756 951 MobiDBLite consensus disorder prediction 291 313 - -
Phco2g02756 951 Pfam Ribosomal protein L10 8 108 IPR001790 -
Phco2g02756 951 SUPERFAMILY Ribosomal protein L10-like 8 134 IPR043141 -
Phco2g02756 951 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 708 940 IPR037217 GO:0019441|GO:0020037|GO:0046872
Phco2g02756 951 FunFam 60S acidic ribosomal protein P0 113 186 - -
Phco2g02756 951 Pfam Insertion domain in 60S ribosomal protein L10P 114 183 IPR040637 -
Phco2g02756 951 Pfam 60s Acidic ribosomal protein 234 315 - -
Phco2g02756 951 CDD Ribosomal_P0_L10e 9 185 - -
Phco2g02756 951 Pfam Hs1pro-1 protein C-terminus 686 946 IPR009743 -
Phco2g02756 951 Gene3D - 706 939 - -
Phco2g02756 951 Pfam Hs1pro-1 N-terminus 499 683 IPR009869 GO:0006952
Phco2g02756 951 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 499 949 IPR038759 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02756 Phco-Chr2 57028802 57038284 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02756 2 57028802 57038284 Phco2g02756 2 57028802 57038284 ECH