Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02696 ATGGCAGAGCCAGAAATCAGCAATAGTAAGAGAGGAGGAAGATGGTCTCTCAGTGGAATGACGGCTCTTGTCACCGGCGGCACCCGTGGGATCGGGCACGCCATAGTGAGTGACTTGACCGCGTTTGGCGCGGTTGTGCACACTTGTTCGAGGACCCAAACAGAGCTCAACAAGTGCTTAGAAGAGTGGCAGAATCAGGGATTTAAGGTTACTGGATCGGTGTGTGACGTGTCCTCGCCGCCTCAGAGAGAGAATCTTATTCAGGAAGTAGCATCCATCTTCAATGGAAAGCTTAACATCTATGTGAACAACGTTGGAACAAACTTTAGAAAGCCAACAATTGAGTACAGTGCTGAAGAATACTCACAGCTGATGACAGTTAATTTAGACTCCTCATTCCATCTGTGCCAACTAGCATATCCTCTTCTGAAAGCATCTGGAAAGGGAAGCATTGTGTTCATTTCGTCGGTTGCAGGTGTGGTCAGCTTGGGTACTGGAGCTGTCTATGCAGGAAGTAAAGCCGCAATTAATCAGCTTACAAAAAATCTGGCATGTGAATGGGCAAAAGACAACATAAGGAGCAACTGTGTTGTACCGTGGGCTACTAGAACCCCGCTTGTAGAACATTTGTTGAAAGACCAAAAGTTTGTGGATGAAATTTTGTCCCGTACTCCAATTAAGCGTATAGCAGAACCTGAAGAAGTGTCTTCGTTGGTGACTTTCCTTTGCTTGCCTGGTGCTTCTTACATCACTGGACAGGTTATACGTGTTGATGGAGGATTAACAGTGAATGGATTTCAACCCAGCATAAGAATTACCTGA 822 0.4586 MAEPEISNSKRGGRWSLSGMTALVTGGTRGIGHAIVSDLTAFGAVVHTCSRTQTELNKCLEEWQNQGFKVTGSVCDVSSPPQRENLIQEVASIFNGKLNIYVNNVGTNFRKPTIEYSAEEYSQLMTVNLDSSFHLCQLAYPLLKASGKGSIVFISSVAGVVSLGTGAVYAGSKAAINQLTKNLACEWAKDNIRSNCVVPWATRTPLVEHLLKDQKFVDEILSRTPIKRIAEPEEVSSLVTFLCLPGASYITGQVIRVDGGLTVNGFQPSIRIT 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02696 273 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 156 184 IPR020904 GO:0016491
Phco2g02696 273 FunFam Short-chain dehydrogenase reductase 7 267 - -
Phco2g02696 273 PRINTS Glucose/ribitol dehydrogenase family signature 169 188 IPR002347 -
Phco2g02696 273 PRINTS Glucose/ribitol dehydrogenase family signature 225 245 IPR002347 -
Phco2g02696 273 PRINTS Glucose/ribitol dehydrogenase family signature 143 159 IPR002347 -
Phco2g02696 273 PRINTS Glucose/ribitol dehydrogenase family signature 190 207 IPR002347 -
Phco2g02696 273 PRINTS Glucose/ribitol dehydrogenase family signature 96 107 IPR002347 -
Phco2g02696 273 PRINTS Glucose/ribitol dehydrogenase family signature 21 38 IPR002347 -
Phco2g02696 273 Pfam Enoyl-(Acyl carrier protein) reductase 28 262 - -
Phco2g02696 273 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 IPR002347 -
Phco2g02696 273 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 96 107 IPR002347 -
Phco2g02696 273 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 157 IPR002347 -
Phco2g02696 273 Gene3D - 11 265 - -
Phco2g02696 273 PANTHER TROPINONE REDUCTASE 14 265 IPR045000 GO:0016491
Phco2g02696 273 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 19 264 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02696 Phco-Chr2 56558680 56561956 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02696 2 56558680 56561956 Phco2g02696 2 56558680 56561956 ECH